Clarias gariepinus (North African catfish): 128542562
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Entry
128542562 CDS
T10780
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128542562 (hcn2b)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
128542562 (hcn2b)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Microp_apicomplexa_15
Ion_trans_2
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
128542562
NCBI-ProteinID:
XP_053368447
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All DBs
Position
15:complement(14137776..14177181)
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AA seq
1012 aa
AA seq
DB search
MDEAEDGDEDRGRERRSRLDSGGLSDPSRTRYFTPGGGAAPSQTPNSSASGPNELRASRD
TDRAPVSLCQGDACGFGFGFSFTSNDDDTRTSATSVDVEQVDEGEEEEEEEDVGMRRAVN
GDCRKDTSSPSLLSKQEKQTGGSVTPEERSAGSACPSATMDGSNTPVGTGAPETEKKDSR
VAFSDPNPAQPAALSKAEDGQMTAEDGEARDSQTYMQRQFSSMLQPGVNKFSLRMFGSQK
AVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITFFKDETTTPWIIF
NVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPKKIKQKYLRTWFVVDFISSIPVDYIFLI
VEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRI
FNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVNDSWSELYSFALFKAMSHMLC
IGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYM
SFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFAN
ADPNFVTAMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNIGMKLSDGSYF
GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLNRIGKKN
SILMHKVQHDLNSGVFNNRENELIQEIVKYDREMVKLVDLQRPRAMSATQSTHSTMFPSS
NQPPTGSAIATLQQAVAMSFCPQMANPLAAHGALQSPRMVRRFQVVQSLSSPGTQQTPPG
SQFSITALPSAFCSTPVQSPLATGGRTCQYSSSPMGAPTGSQLSLAQQHISSPTHRATVP
RSAMTQDARALSASQPSLPHDAMQPAAPSPPQSTRVSSSSIGPPHNLPGPTGLRAAIPPR
MTLQHQMSVGAFPPASLPQMRPSQDSGLPKKDSVVSLPDTDHHVRSRLSSNL
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcggaggatggcgacgaggaccgcggccgcgagcggcgttcgaggctcgac
agcgggggcttatctgacccttccaggaccaggtatttcactccaggagggggagcagca
ccgagccagacccccaacagcagcgccagcggaccaaacgagctccgtgcgtcgcgcgac
acagaccgtgcgcctgtctctctgtgccagggcgatgcgtgcggcttcgggtttggattc
agtttcacgagcaacgacgatgacacgaggacctcggccactagtgttgatgtggagcaa
gtagacgaaggcgaggaagaggaggaggaggaggacgtcggcatgagacgcgctgtgaac
ggagactgcaggaaagacacgagctcgccttcactcctctccaaacaggagaagcagaca
ggtggctcggtcacacctgaggaaagaagtgcgggtagcgcatgcccttccgccaccatg
gatggttcgaacacgcccgttggtaccggagcccctgagacggagaagaaggactctcgg
gtggctttttctgacccgaatcccgcgcaaccagccgcgctttccaaggccgaggacgga
cagatgacagcggaggatggagaggccagggacagtcagacctacatgcaacggcagttc
agctccatgctgcagcccggagtcaacaaattctccctgcgcatgtttggcagccagaaa
gcagtcgagaaagaacaggagcgagtaaaatctgccggcaactggatcatccacccgtac
agtgatttcaggttctactgggacttcacaatgctgatgtttatggtgggcaacctaatc
atcattccagttggcatcaccttcttcaaagatgagaccaccacaccctggattatcttc
aatgtggtctcagacactttcttcctcatggacctggtgctcaacttccgcacaggcatc
gtctttgaggacaacacagagatcattctagaccctaaaaagatcaagcaaaagtattta
cggacttggtttgtagtggactttatctcatctatccctgtggattatatttttctcatt
gtggagaaaggcattgactctgaggtttataagacagcaagggcattgcggatcgtgcgc
ttcaccaaaatccttagcctgttgaggcttctgagactttccagacttattcgctacatc
catcagtgggaggagatctttcacatgacctatgacctggcgagtgctgtcatgcggatc
tttaacctgattgggatgatgctgctgctgtgccactgggatggctgcctgcagtttctc
gtgcccatgctgcaggactttccctctgactgctgggtttcccttaacaagatggtgaat
gactcatggagcgagctgtattcctttgccctgttcaaggccatgagccatatgctgtgt
atcgggtacggacgccaggccccagagagcatgtctgatatctggctcaccatgctgagc
atgattgtgggagccacctgttacgccatgtttattggccatgctaccgctctcatccag
tcgctggactcgtcacgccgccagtaccaggaaaagtacaaacaagtggagcaatacatg
tccttccacaaacttcccgctgatttccgacagaagatccacgattactatgaacacaga
taccaaggcaagatgtttgacgaggagagtattttagaggagttaaatgagccactgaga
gaggaaattgtcaactttaactgccgcaagctggttgcctctatgccacttttcgcaaat
gctgatcccaactttgtgacggccatgctgaccaaactacgattcgaggtcttccaacca
ggagattacatcatccgtgaggggaccattggaaagaagatgtatttcatccagcacgga
gttgtgagcgtccttacgaaaggcaacataggcatgaagctttctgatggctcttatttt
ggagagatttgcctgctgactcggggaagacgcacagccagcgttcgagctgacacctat
tgccgtctgtactcactttctgtggacaactttaatgaagttttagaggaatatccaatg
atgaggagagcctttgagaccgtggccattgacagattaaatcggataggcaaaaagaac
tccatcctgatgcacaaagttcaacatgacctgaactctggagttttcaacaatcgtgag
aatgagctaattcaggagattgtgaagtatgaccgggaaatggtgaaattagtggacctg
caaagacccagagccatgtcggccactcaatctactcatagcaccatgtttccttcttcc
aatcaacctccaacaggctctgccattgccaccctgcagcaggctgtagccatgagtttc
tgtccacagatggccaacccactggcagcccatggagctcttcagtctccccgcatggtg
cgccgtttccaggtagtccaaagcctctccagccctgggacccagcagacccctccaggc
tcacagttctccatcactgctctgccctctgcgttttgcagcacaccggttcagagccca
ttggctactggaggccgaacatgtcaatacagttccagccctatgggtgctccaacaggc
tcccagctctctctggcacagcagcatatctccagccccacacaccgtgcaactgttcct
aggagtgcgatgacccaggatgctagggccctctctgcctcccaaccatctttgccccac
gatgccatgcaaccggctgccccaagtccaccccagtcaacgagagtttcctccagctct
attggaccacctcacaacctcccgggacctacaggcttaagagctgccattcctcccagg
atgacacttcagcaccagatgtctgtgggagctttcccacctgcctcattaccacaaatg
agaccaagccaggactcgggactgcccaagaaagattctgtagtcagccttccagacacg
gaccatcacgttagatctagattatcttccaatttgtga
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