Clarias gariepinus (North African catfish): 128542566
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Entry
128542566 CDS
T10780
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
KO
K05842
toll-like receptor adapter molecule 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04217
Necroptosis
cgar04620
Toll-like receptor signaling pathway
cgar04621
NOD-like receptor signaling pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128542566 (ticam1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128542566 (ticam1)
04621 NOD-like receptor signaling pathway
128542566 (ticam1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128542566 (ticam1)
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Gene cluster
GFIT
Motif
Pfam:
TIR_2
Motif
Other DBs
NCBI-GeneID:
128542566
NCBI-ProteinID:
XP_053368454
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Position
15:complement(16078184..16081742)
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AA seq
503 aa
AA seq
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MAEETALVGEKKLTELCAKPSALVNILPERSIVGLRVTENTGAGCLIMGSSLQPSRGTSE
VLNTQKEPPKRGDSYPSSLRSTSTSCTSCSSYSLEISLSTTNNSDKASRPLPLKTPSESR
DGQSHEAKHPSPMVCEKSVPSVTKSYRPSDPKPLQEKEQQTEIKVRQCLDKHGSSEIVTP
KSPSIESRPEKTFLSSSSDNGKVSAQPMSTNQSPKTTCTQDVGKHDGNSTGMKASQEEEG
MFYAFVILHAQEDSDEAVRLKSRLESISSTIGATFSEDFAVPGQSTFRCVEDAIENSAFV
MLLLTTNFNTRLNETSADSALMNSIEKPHKYNTVIPLLPRANGLTRNQMPFILKTKNPLD
ETRDKNIFEKMVQKVLDSRNIQKQKLSWSMEQSVKKQRERQQWLQEERQYYSDVIRESTK
VQELEKQLHMQQQRLLPPFSGRPQSLGPMLAQNPSPMPSYNSGSMWQQPPSNIHIENAKY
IMIGNNSTMTVGQGVDSGEEDDF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagacggcactggtgggtgaaaagaagctgacagagctctgtgcgaaaccc
agcgctttggtaaatatccttccagaaagatcgattgtaggattaagagtcactgagaac
acaggtgctggatgtctaataatgggttcctccttacagccaagcaggggaacctctgag
gtattaaacactcagaaagaaccacctaaacgaggtgatagctacccatcctctcttcgc
tccacctccacttcttgcacatcctgcagttcctacagtctagaaatcagtttatccaca
accaataacagtgacaaagcatctagaccactgcccctaaagacaccgtcagagagcaga
gatggtcaaagccatgaggccaagcacccaagtcccatggtctgtgagaaatcagttcct
tcagtaaccaagtcatatagaccttcagatcccaagccacttcaggaaaaggagcagcaa
acagaaataaaagtcaggcagtgtctagataagcatggcagttctgagattgtaacaccc
aagagtccaagtatagaatccagaccagagaagacatttttgtccagctctagtgataat
ggcaaggtatcagctcaaccaatgtcaacaaaccagtcacctaaaacaacttgcactcag
gacgttggaaagcatgacggcaatagtacaggaatgaaggccagccaagaggaggagggc
atgttttatgcatttgtaatcctgcatgcacaggaggactctgatgaagctgtgagactc
aagtccaggttggagtcgatctcctcaacaattggagcaactttctctgaggactttgca
gtgcctggtcagtccacctttaggtgtgtggaggatgctattgagaactcagcctttgtc
atgctgctactcacaacaaactttaacactcgactaaatgagacaagcgcagattctgca
cttatgaactcgattgaaaagccacacaaatacaacactgttatccctctgctgccccgg
gccaatggtttgactcgtaaccaaatgcctttcattttgaaaactaaaaacccactagat
gaaacgagggacaaaaacatttttgaaaaaatggttcaaaaggtcttggactcgagaaac
atacagaaacagaagttatcgtggagtatggaacaatcggtaaagaaacaaagagaacga
cagcagtggcttcaggaggagagacagtattatagtgatgttattcgagagtctacaaag
gtccaggagttagagaagcaactgcatatgcaacagcaacgactgcttcctcctttttct
ggaagaccacaatcgttaggtcccatgcttgcccaaaatccaagtccaatgccttcctac
aacagtgggagtatgtggcaacaaccaccatccaacatccacatcgaaaatgctaaatac
atcatgattgggaataactctaccatgactgtgggacaaggtgtagactcaggagaagaa
gatgacttctaa
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