Clarias gariepinus (North African catfish): 128542577
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Entry
128542577 CDS
T10780
Name
(RefSeq) platelet glycoprotein V-like
KO
K06260
platelet glycoprotein V
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128542577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgar04090
]
128542577
CD molecules [BR:
cgar04090
]
Proteins
128542577
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
DHU1_N
LRR_LRWD1
BPD_transp_1
YnaM
Motif
Other DBs
NCBI-GeneID:
128542577
NCBI-ProteinID:
XP_053368467
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All DBs
Position
15:4371946..4374536
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AA seq
638 aa
AA seq
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MWLIFIVLHLGLLVPLSLSCPSACVCLPNGDVTCTGGITEIPHLAANQTFRLKLNNTLIK
ILHPKSLQPLVFLLRLQISHSPLATIHPEAFYGASQLKSVVLSSTNISDLPPRVFSSLEN
LEQLYINKSQLMSLPADIFKHLVNLTELDISMNQIANLDARIFQNVTKLTYLNLGKNFLQ
MIPQMMFHNLRQLKSLILSSNQLRTIEEGSFDHLNNLLLLMLDKNQIQGIPSRLFWHMPS
LLILTLSSNQLRYIPRETFYYLPNLTKLTLYKNPLISLPDQLVGHMPRLQEFYLYNTNLI
TVPWNLFANMTGLKSLHLHYNEKLISLPKDVFSHLPNLEKLSLRKNILQDLHKDQFSSLT
KLRSLNIYGNKLRSLSAKIFQNLHSLTHLQLNNNNLNNLPGDIFAHLTVLKSVTLGHNQW
NCTCSILDIAAWISDNRNVVTDLHDVLCHEPYHLINKSLVTLTNDSLKCGVTTTGDLHVT
MTTEEIQAYSSERTTASFFTDIKNISNVATNTILSTTVPPVHRTLQTLSSTAYTFKKPHT
ARSMPNVFYDTVVLVNGPDIVHNNRRQGWVYLWTVPTSGAYSSFLMALHVVLIITGVLLI
IFSAFAFYHLHKALWKTGMTLRHQTIKTKRLRSFNGKL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtggctaatatttattgtactgcatttgggattgctggtcccactcagtctttcctgt
ccaagtgcctgtgtgtgtttaccaaatggggatgtcacatgcacaggaggaatcactgaa
atcccacatctggcagccaatcaaaccttccgcctaaaactcaataacactcttataaaa
atccttcatccaaaaagtcttcagcctcttgtctttttactacgcctccaaatcagccac
agtcctcttgccactattcacccagaagccttttatggtgcttctcagctgaagtcagtt
gtgttgtcatctaccaatatctctgaccttccaccaagagtgttcagcagcctggagaac
ctagagcaactttacatcaataagagtcaactgatgtctctccctgcagacatttttaaa
catttggtcaacctcactgaactggacattagcatgaaccaaatagcaaatttggatgct
agaatcttccagaatgtgacaaaattgacttacctgaacctgggtaagaacttcctacaa
atgatcccacagatgatgttccacaaccttagacagctcaagtccctgatactgtcctcc
aaccagctgaggacaatagaagaaggctcatttgatcatctgaacaacctgttattactc
atgctggataaaaaccaaattcagggaataccttccagacttttttggcacatgccctca
ttgttaatcctgactctatctagcaaccagcttcgttatattccaagagagactttttac
tatctacccaatcttaccaaacttacactctacaaaaatcccttaatctcgctgccggac
cagctagtcgggcacatgccaagacttcaggagttctacctgtataataccaatcttatc
actgtgccctggaacctttttgcaaacatgactggcctcaagtctttacatttacattat
aatgagaagcttatctcactaccaaaggatgtcttttctcacttgcctaatcttgaaaag
ctatctttaagaaaaaacatacttcaggatttacacaaagatcagttttcatccttaact
aaacttaggagtttaaatatttatggtaacaagctccggtccctttctgcaaagatcttt
caaaatctccatagcctaacccatcttcagctgaacaacaacaatctgaacaatcttcca
ggagatatttttgcgcatctcactgtattgaagtctgtcactcttggacacaaccagtgg
aactgcacatgcagtatcctggacattgcagcatggataagtgacaaccggaatgtagtc
actgacctacatgatgtattatgccatgaaccttaccacttaattaacaaatcactagta
acgttaactaatgacagtctgaaatgtggcgttaccactacaggagacctacatgttacc
atgaccactgaagagatacaggcgtattcttcagaaagaacaacagcatcatttttcact
gacattaaaaacattagcaatgtcgctacaaataccatcttgtcaaccactgtacctcca
gttcatcgtaccttacaaacactttcttcaactgcttatacatttaagaaaccacatact
gctcgctccatgcccaatgtattctatgacactgtggtccttgttaacggccctgatatt
gtccataataatcgccgtcagggctgggtgtacctgtggacagtacctacgtctggagca
tacagtagttttctaatggctttgcatgttgttcttattatcaccggtgttcttctgatt
atattcagcgcctttgcattctaccatctacacaaagctttgtggaaaacagggatgact
cttagacatcagacaatcaaaactaaaagattgcggagttttaatggcaaactttag
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