Clarias gariepinus (North African catfish): 128542584
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Entry
128542584 CDS
T10780
Symbol
use1
Name
(RefSeq) vesicle transport protein USE1 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128542584 (use1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128542584 (use1)
Membrane trafficking [BR:
cgar04131
]
SNARE
SNAP-25[C] (Qc)
Use1
128542584 (use1)
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Gene cluster
GFIT
Motif
Pfam:
Use1
DUF7610
MCU
AAR2
DUF4870
DUF1993
FapA
Motif
Other DBs
NCBI-GeneID:
128542584
NCBI-ProteinID:
XP_053368477
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Position
15:complement(18278603..18283908)
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AA seq
258 aa
AA seq
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MAASRLEINFIRLLSRCEAIASEKRGETEWRLEKYVGALEDMLVALRKSPGKPTTEMLTD
YTRKVDFLKGLIKAEKLSSPSEKALANQLLAPGRTPTISSERMSATKTVHMQSKARCTGE
MRSELFSTNASSAGSETELRHRSRSVPADECESAAELDAVLQHHHSLQEKLAEDMLNLAR
NLKNNTLAAQNIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHAKKSVNWLLWLMLILV
SFTFISMILFIRIFPRLR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccaggttagaaatcaattttatccggttattgtcccgctgtgaagctatt
gcttctgaaaaaagaggggagacggaatggaggctggagaagtacgtaggtgctttggaa
gacatgctggtggcgttaagaaaaagtccaggcaaacctactacagaaatgctgacagac
tacacacgtaaagttgacttcctgaaaggtcttataaaggctgagaagctgtcatcacct
tcagagaaagctttagccaatcagctcctggcgccaggtcgcacacccaccatctccagc
gagaggatgtcagccaccaagacggtgcacatgcaaagtaaagcacgatgcacaggggag
atgcgctctgagctttttagtactaatgcttcaagtgcaggttcggagacagagttgaga
catcggagccgcagcgtccctgcggacgagtgtgagagtgcagccgagctggacgccgta
ctgcagcaccaccacagtctgcaggagaagcttgctgaggacatgctgaacctcgcacgc
aacctgaagaacaatacactcgctgcacaaaacatcataaaacaggacaaccagactctg
agtcagtccatgcggcaggcagatctaaactttgagaagctgaagaccgaatcagagcga
ctggagcagcatgcaaagaaatctgtcaactggctcctctggctgatgctcatattagtc
tcgttcaccttcatcagtatgatcttgttcatccgcatctttcccagactcaggtga
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