Clarias gariepinus (North African catfish): 128542602
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Entry
128542602 CDS
T10780
Symbol
tradd
Name
(RefSeq) tumor necrosis factor receptor type 1-associated DEATH domain protein
KO
K03171
tumor necrosis factor receptor type 1-associated DEATH domain protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04210
Apoptosis
cgar04217
Necroptosis
cgar04622
RIG-I-like receptor signaling pathway
cgar04920
Adipocytokine signaling pathway
cgar05132
Salmonella infection
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128542602 (tradd)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128542602 (tradd)
04217 Necroptosis
128542602 (tradd)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128542602 (tradd)
09152 Endocrine system
04920 Adipocytokine signaling pathway
128542602 (tradd)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128542602 (tradd)
09171 Infectious disease: bacterial
05132 Salmonella infection
128542602 (tradd)
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Gene cluster
GFIT
Motif
Pfam:
TRADD_N
Death
Transgly
Motif
Other DBs
NCBI-GeneID:
128542602
NCBI-ProteinID:
XP_053368498
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Position
15:complement(30993685..31001565)
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AA seq
294 aa
AA seq
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MDRNTGTQKSAVSGLDDRAWSGCVVLFLRCCSPEPDLLSFYKDQQEKFSIFKTIKLTLTD
VAGGLDGYEILKLHDADPFLGVELKFMDILPCRRFLDSYSCGSLLQFLSQHASRLLSLPS
GLGVESMLKAGTHTLDNSIQDPELCLQLIYQSQPVRLRDDEVTLLEQQLQNSYIPPVQTQ
KEVPKDCFMFQKHQFEDRALTPMDQQRFASHVGRDWKRVGRALQKNCRALKGTAIDNLAY
EYEREGLYEQAYQLLGRFIQSEGRNARLGRLISALEEAKLISMAEIMLDIQPRE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaacacaggtacacagaagtcggctgtgagcggtctggacgatcgtgcctgg
tcggggtgtgttgtgttgttcctgcgttgctgcagtcctgaacctgatcttctgtccttc
tacaaagaccaacaggagaagtttagcatcttcaagaccattaaactcacactcacagat
gttgcaggtggacttgatggttacgagatcctcaagcttcacgacgccgacccgttcctg
ggagtggagctgaagttcatggatatccttccctgtaggcgtttcctcgacagctactcg
tgtggctcgctgcttcagttcctctcccagcatgcatcacgcctactctcgcttcccagt
ggtctgggcgtggagtccatgctcaaggcaggaacacacaccctggacaacagcattcag
gatccagagctctgtctacagctcatataccagtctcagcccgtgcgtttgcgggacgac
gaggtcacgctgctcgagcagcagctacagaacagctacattccacccgtccagacgcaa
aaggaagtgcctaaggactgcttcatgttccagaaacaccagtttgaggacagggctttg
actcccatggatcagcagcgcttcgcttctcacgtgggccgtgactggaagcgagtgggt
cgagcgttacagaagaactgccgtgcgctgaaggggacggccatcgacaatctcgcgtat
gagtacgagagggaggggctttacgagcaggcctatcagctactgggacgcttcatccaa
tcagagggccggaacgccagactggggcgtctcattagcgcactggaggaagccaagctg
atcagcatggctgagattatgttggacattcagccacgagagtga
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