KEGG   Clarias gariepinus (North African catfish): 128542672
Entry
128542672         CDS       T10780                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cgar03009]
    128542672 (wdr18)
Ribosome biogenesis [BR:cgar03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    128542672 (wdr18)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WDR18_C WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EML WDR55 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_RIG_2nd WD40_RFWD3 WDR54 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_DCAF12 Ge1_WD40 KNTC1_N Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 128542672
NCBI-ProteinID: XP_053368599
LinkDB
Position
15:8765009..8852758
AA seq 431 aa
MSAPVEVVVTADSAGQLWNCAVFDPHTGTNLLSYRGGNSSARALTILNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPDGLYLLAGIAEAIYLWEVSTGNLLVILNRH
YQDLSCLRFTDDSSHFVSGGKDNLALVWNLASVVQLDSSRTPEPRHVLSRHTLPITDIHC
GLMGAQARVATASLDQTVKLWEISSGEMLLSVLFDVSIMSVTLDPCEYFLFCGGSDGNIF
QVSLCSTALSRDKTFQSDGEGNQVFKGHRNLVMCLSVSMDGTLLLSGSHDETVRMWDVQS
KQCIRCISHKGQVTNAAIVPAPGNMFLPDSRPGIPLPRFSRHLNNSEHAEGAGTGGMCLR
LAANCQDSGETYLEKADRLHSLMCAVTDKSVFGDGENTKVRVSELEEEVRTLKKINKDLY
EFSTQLLTKPN
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtcggcgcccgtggaggtggtggtgactgcggactcggcggggcagctgtggaactgc
gctgtgttcgaccctcacaccggaacaaacctcttatcctaccggggcgggaactcatca
gctcgagctttaaccatcctcaacggagagtacatcctcggagctcagctcggcaagaac
ttcatcaacgtgtgggagatccagaggaaggaccagctgcagcagaaaattgtgtgtcct
gggattgtaacctgcctgacagcctcccctgatggcctctatctgctggcaggcattgct
gaagccatatatctgtgggaggtttcaactggaaacctgctggttattttgaatcgtcac
taccaggacctgagctgcctgcggttcactgacgacagcagccattttgtgtccggagga
aaagacaatctggcacttgtatggaacctcgccagtgttgtacagttggactcctctcgc
accccggagcctcggcatgtgttatcacgccacactcttcccatcaccgatatccactgt
gggctgatgggagctcaggcaagagtggctactgcgtctttagaccagactgttaagctg
tgggaaatctcctcaggagagatgcttttgtcagtcctctttgatgtcagcatcatgtca
gtgacccttgacccttgtgagtacttcctgttctgtggaggaagtgatgggaatatcttc
caggtctccctctgtagcacggctttgagtcgggataagaccttccagtcagacggcgaa
ggcaatcaggtgttcaaaggccacaggaacttagtgatgtgcctgtctgtgtccatggac
ggtacgctgctgctgtcaggttcgcatgacgagactgtcaggatgtgggatgttcagagc
aagcagtgcatccgctgcatcagccacaaaggtcaggtgaccaatgctgctattgttcca
gccccggggaacatgttcctacccgacagtcgacctggcatcccgttaccccgcttcagc
cggcatctgaacaattccgagcacgccgagggagccggaacgggaggaatgtgtctcagg
ctggccgccaactgccaggactcgggggagacatatctggagaaggcagaccgcctccat
tctcttatgtgcgctgtaacagacaagagcgtgttcggtgatggcgagaacacgaaggta
cgcgtgtcagagttggaagaagaagtgaggaccctgaagaaaatcaacaaagacctgtac
gagttttccacacagctcctgacaaagcctaattag

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