Clarias gariepinus (North African catfish): 128542689
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Entry
128542689 CDS
T10780
Symbol
fbn2b
Name
(RefSeq) fibrillin-2b
KO
K23342
fibrillin 2/3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128542689 (fbn2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128542689 (fbn2b)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128542689 (fbn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
hEGF
FXa_inhibition
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128542689
NCBI-ProteinID:
XP_053368621
LinkDB
All DBs
Position
15:15959284..16030343
Genome browser
AA seq
2864 aa
AA seq
DB search
MGAWTAAKVVLGWAAVCWASFQMVQAQGDGGLQASLFNGKPEGEVQQRVRRRGQDTLRGP
NVCGSRFQPYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCSSGHLAPSCGAAAA
AVQSCNVRCMNGGACNEDSCACLKGYTGTHCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVSNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRRG
FIPNIRSGACQDVDECQAIPGLCAGGTCINTVGSYECKCPAGHRQSETNQKCEDVDECST
IPGVCDGGECTNTAGSYVCTCPRGFVTSADGSRCIDQRLGICFASLANGRCAMEMTGQYT
KMQCCCDTGRCWAMGHIPEMCPVRGSDEYRRLCIEGIPFTTGRETINLFNGHKYPGQNGH
GPGHGNGNGNGNGNGGDWPKIDTRPIIVLPQNVSTTIDVCKHFPNLCLNGRCIPTPNSYR
CECNMGYSQEGPGQCTDVDECSSNPCVNGDCINTPGSYHCKCHEGYQGTPTKQACIDIDE
CIVNGIMCRNGRCVNTEGSFQCICNAGFEISPDGKNCIDHDECATTNMCLNGMCINEDGS
FKCICKPGFTLAPNGRYCVDIDECQTPGICMNGRCLNSEGSFRCECPPGLAIDLDGRVCV
DTHMRTTCYGTIKMGTCSRAFPGAVTKSECCCANPEHGFGQPCQACPARNSAEFQSLCSS
GIGMTIDGRDINECGLNPDICKNGVCENLRGSYRCICDFGWEPDSSGKNCVDVDECLVNR
LLCDNGQCRNTPGSYACSCPKGFIFKSDSETCEDINECESNPCINGICRNVAGSFTCECS
HGSRLDSNNICVESMKGTCWLHAQDGHCEVNINGATLKSECCSTLGAAWGSPCEICETNP
HCPRGLTRRKGLVCEDINECEVFPGVCTNGRCVNTHGSFRCECSEGLTLDESGRTCVDIR
SEQCYLKWDEDECGEPLPGRYRLDMCCCSVGEAWGSDCEACPKAGTPEYKSICPRGPGFA
NRGDIVTGRPFYKDVNECKVFKGLCTHGTCRNTIGSFKCRCNNGFAPTMEQRNCTDIDEC
AISPDLCGQGTCVNTPGSFECECFDGYESGFMMMKNCMDIDECERDPLLCRGGTCLNTEG
SYECECPQGHQLSPGGSACEDVNECELSDNLCRNGKCVNMVGFFQCSCNTGYQATPDKQG
CVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPDLRTCADIDECEDTPDICDGGQC
TNIPGEYRCLCFDGFMASMDMRSCVDVNECDLNPNICLHGDCENTKGSFICHCQLGYFVK
KGSTGCTDINECEIGAHNCDMHAACVNVPGSFKCRCRDGWVGDGIKCVDLDECSTEDHSC
NPNADCVNTPGSYRCACKEGFNGDGFSCSDTDECADNVNLCENGQCLNTPGGYRCECEMG
FTPTEDSKTCQDIDECNFQNICVFGTCQNLPGMFRCVCDDGYELDRSGGNCTDVNECADP
VNCINGLCVNMPGSYMCNCPPDFELNPTGVGCVDTRVGNCFLDTLDRGDGGISCSAEIGV
GVSRASCCCSKGGAWGNPCELCPMINSTEYKTLCPGGEGFRPNPITVILEDIDECQELPG
LCQGGNCVNTFGSFQCECPAGYFLNEETRICEDIDECSTHIGICGPGTCYNTLGNYTCIC
PPEYMQVNGGNNCMDMRKSVCYHNFNDTCENELSFNMTKKMCCCAYNVGKAWNKPCEPCP
TPATSEYELLCGNPAPGFIIDIHTGKPIDIDECREIPGICAHGACINQIGSFRCECPMGF
SYNNILLVCEDIDECNSGDNLCQRNANCNNIPGSFRCECSPGFKLSPSGACVDRNECLEI
PNVCSHGECIDTQGSYRCLCHNGFKATADLTMCMDIDECERQPCGNGTCKNTVGSYNCLC
FPGFELTHNNDCMDVDECTTLAGQVCRYGQCINSLGSFQCLCLEGYELTPDSKNCVDINE
CVTYPGTCSPGTCQNLDGSFRCICPPGYELQNENCIDIDECESQPNLCLFGQCFNTPGSF
QCTCQPGFVLSDNKRRCFDTRKSFCFTRFEASKCSVPKPQNISKADCCCSLMPGEGWGDP
CELCPQEGQAAFKQLCPYGHGAVPGLGEGRVDMNECLDNPCKNGACINTDGSFRCECPFG
YNLDYTGIECVDTDECSIGNPCGNGTCTNVVGGFECSCQEGFEPGPMMTCEDINECTLNP
LLCAFRCVNTFGSYECMCPSGYVLREDQRMCRDQDECSEGLDDCESRGMVCKNLIGTFMC
ICPPGMTRRPDGEGCMDLNECRSKPGICKNGRCVNTVGSYRCDCNEGFESSSTGTECIDN
RQDYCFTEVLQTMCQQSSTNRNTVTKSECCCNGGRGWGQQCELCPLPGTVQYKKMCPHGP
GYTTDGRDINECKVLPNLCRNGECINSVGSFRCHCNVGYTNDFSGTSCIDLDECSQSPKP
CNFLCKNTEGSYLCSCPRGYILQPDGKTCKDLDECSTKQHNCQFLCVNTIGGFTCKCPSG
FTQHQTACIDNNECTSQPSMCGSRASCLNTPGSFSCECQKGFSLDTTGVECEDVDECTGN
HRCQHGCQNMMGGFRCGCPQGYVQHYQWNQCVDENECNGNQMCGSASCYNTLGSYKCVCP
SGFDFQQSAGGCQDVNECTMSSNPCTYGCSNTDGGYLCGCPGGFYRAGQGHCITGAGFQG
QFGSEEDEDSALSPEACYECKINGNKGGRHRRNAGDNELKETVSMASVDTQNSIPMNLSL
ASLQNREPLLELLPALEPLEHHIRYVITHGNQGDHFRLLERRDGKTVLRLGRKTPPAGAY
RLEIASLPLYGPRQLRQLEDQHDSDYLLGEIGDALRIKLHIYLH
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgggggcttggactgcggccaaggtggtgctgggatgggctgccgtgtgttgggcgtct
ttccagatggtgcaggctcagggagatggaggcctgcaggcgagcctctttaatgggaag
ccagagggggaggttcagcagagggtgcgccggagaggacaagataccctcagggggccc
aatgtgtgtggttctcgattccagccctactgctgcccaggatggaaaacactgcctggg
ggaaaccagtgtatagttccaatttgtaggaactcctgtggtgatggcttctgctcgagg
ccaaacatgtgtacctgctccagtggtcaccttgctcccagctgtggagctgcagctgct
gcagttcagtcctgtaatgttcgttgtatgaacggaggcgcctgtaatgaagattcttgc
gcatgtctgaagggatatacagggactcactgtggacagcctgtttgtgagaacgggtgt
cagaatggtgggcgttgcattggaccaaacagatgtgcgtgtgtttatgggtttactggt
ccacagtgtgagagagactacaggactggaccatgcttcacacaagtcagcaaccagatg
tgccagggtcagctgagtggcattgtgtgcaccaagacactgtgctgtgccaccattggc
cgagcgtggggtcatccgtgtgagatgtgccctgcccagccgcacccctgtcgcagaggg
ttcatccccaacatccgcagcggcgcctgccaagatgtggacgaatgccaggccatccct
ggactctgtgcgggagggacctgtatcaacactgtgggttcgtacgagtgtaaatgtcca
gcaggccatcggcagagtgagactaaccaaaaatgtgaagatgtggatgaatgttccacc
atcccaggggtttgtgacggtggggaatgcaccaacactgctggcagctatgtttgcacc
tgtccacgtggctttgtcaccagtgcagatggctccagatgtatagatcagagactggga
atttgttttgcctccttggctaatggacgatgtgcaatggaaatgactggccagtacacc
aagatgcagtgctgctgtgatacaggccggtgctgggccatgggtcacattccagaaatg
tgtccagttcgtggttctgatgaatatcggagactgtgtatagagggaattcctttcaca
accggcagagagactattaacttgtttaatggtcacaagtatcctggacagaatgggcat
gggcctggacacggcaatggcaatggaaacggcaatggcaatggaggagactggcccaag
attgacacacgtccaataattgtactgcctcagaatgtaagcacgaccatcgatgtgtgt
aagcatttccctaatctgtgtctgaacggccgctgcatccccaccccaaacagctaccgc
tgcgagtgtaacatgggctatagtcaggaagggcctggccagtgcacagatgttgatgag
tgtagcagtaacccttgtgtgaatggagactgcattaacaccccgggctcgtaccactgc
aaatgccacgaggggtatcagggaacccccaccaagcaggcctgcattgatattgatgaa
tgtattgttaacggaatcatgtgtcgcaacggccgctgtgtgaacacagaaggaagtttc
cagtgcatctgcaatgctggctttgagatcagccctgatggaaagaactgtatagatcat
gatgaatgtgcgacaaccaacatgtgtctgaatggcatgtgcattaacgaggacggcagc
ttcaaatgcatctgtaaacctggcttcaccctggctccaaacggacgctactgtgttgac
atagacgaatgccagacgccagggatctgcatgaatggccgctgtctgaactcggagggc
tcgttccgctgtgagtgcccgcctgggctggccattgacttggatggccgtgtttgtgtg
gacacacacatgcgtaccacctgctacggcaccattaagatgggcacatgctcacgggcg
ttccctggcgcagtgaccaagtctgagtgttgctgtgccaatcccgagcatggatttggc
cagccatgtcaagcttgccctgctcgcaattcagctgagttccagtctctgtgcagcagt
ggcattggcatgacaatagatggaagagacatcaacgagtgcggtttgaacccagacatc
tgcaagaatggggtgtgtgagaacctgcgtgggagctaccgctgcatctgtgacttcggc
tgggagcccgactccagtggcaagaactgcgtggacgtggacgagtgtctggtaaaccgg
ctgctgtgtgataacggccagtgcagaaacacgcctggaagctatgcctgctcctgcccc
aaaggtttcatcttcaaatctgactcagagacatgtgaagacattaatgagtgcgagtct
aacccctgcatcaatggaatctgccgaaacgtggccggctcttttacctgcgagtgttct
cacggcagcaggttagactccaacaacatctgtgtggagagtatgaaaggtacctgctgg
ctgcatgctcaggatggccactgtgaggtgaacatcaatggagctacactcaaatcggag
tgctgctccactcttggcgcagcatggggaagtccatgtgaaatatgtgaaacaaaccca
cattgcccccgtggtctcactcggaggaagggacttgtgtgtgaagacattaacgagtgt
gaggttttcccgggtgtgtgcactaacggacgctgcgtgaatacacatggctcgttccgt
tgcgaatgctccgagggactcacgctggacgagagcggccgcacctgtgtcgatatccgc
agtgagcagtgttatctgaagtgggatgaggatgaatgtggtgagccgttaccaggccgt
taccgcttggacatgtgctgctgctcagtgggtgaagcgtggggttcagactgtgaggcc
tgccctaaagccggcaccccagagtacaagagcatctgccctcgaggcccaggcttcgcc
aacagaggagacatagtcaccggcagacccttctacaaagatgtgaacgaatgtaaagtg
tttaagggtctgtgcacgcatggaacgtgccggaacaccattggcagtttcaagtgtcgc
tgtaacaatggtttcgcaccgaccatggaacagagaaactgcacagacattgacgagtgt
gctatctctccggacctatgtggtcagggtacatgtgtgaacacgccaggcagcttcgag
tgtgagtgcttcgatggatacgagagtggatttatgatgatgaagaactgcatggacatt
gatgaatgtgagagggatcctctgctatgtcgtggaggtacttgtctgaacacagagggc
agctatgagtgtgaatgcccccaaggtcaccagcttagccctggaggctccgcctgtgaa
gatgtaaacgagtgcgagctgagtgataacctctgcagaaacggcaagtgcgtgaacatg
gtgggctttttccagtgctcatgtaacacaggctaccaggccactcctgacaagcagggc
tgtgtagatatcgatgagtgcacaatcatgaacggaggctgtgatacacactgtacaaac
tcagagggcagctatgagtgcagctgcagtgagggatatgccctgatgcctgacctcagg
acctgtgctgacattgatgagtgtgaggacactccggatatctgtgacggtggtcagtgc
accaacatccctggagagtaccgctgcctttgcttcgacggctttatggcctccatggac
atgcgctcatgtgttgatgtcaacgagtgtgacttgaaccccaacatctgtctgcacggc
gactgtgaaaacaccaagggctctttcatctgtcattgccagctgggatactttgtgaag
aaaggctccactggctgtacagatatcaacgagtgtgagatcggtgctcataactgtgac
atgcatgccgcctgcgtcaacgtccctgggagctttaaatgccgctgcagggacggctgg
gtgggagatggaattaaatgtgtagatttggacgagtgctcaacagaggaccatagctgc
aaccccaacgctgattgtgtcaacactcccggctcataccgctgcgcctgcaaggagggt
tttaacggagatggcttctcctgctctgataccgacgagtgtgcagataacgtcaacctg
tgtgagaatggtcagtgtctgaacacccctggaggctaccgctgcgagtgtgagatgggc
ttcactcctactgaggacagcaagacatgccaggacatagatgaatgcaacttccagaac
atttgtgtgtttggaacatgccaaaatctgcccgggatgttccgctgtgtgtgtgacgat
ggatacgaactggaccgcagtggaggcaactgcacagatgtgaatgagtgtgctgaccca
gtgaactgcattaatggcctgtgtgtgaacatgccaggaagctacatgtgtaactgccca
ccagactttgagctcaaccccacaggagtgggctgtgtcgacactcgggtgggtaactgt
ttcctggacacattggatcggggtgatggcggcatttcatgcagtgctgagattggagtg
ggcgtgtcccgagcctcctgttgctgctctaagggcggagcttgggggaacccatgtgaa
ctttgtcccatgatcaactccactgaatacaaaactttgtgccctggaggagaaggcttc
cgacccaacccgatcacagtcattctggaagacatagatgaatgccaggagctgcccggc
ctgtgtcaggggggcaactgtgtcaacactttcggcagtttccagtgtgaatgccctgct
ggatacttcctaaacgaggagacacgcatctgtgaagacattgacgagtgctcaacccac
attgggatctgtggcccaggaacatgttacaacacactgggcaactacacatgcatctgc
cctcctgagtacatgcaggtcaatggaggcaacaactgcatggacatgcggaaaagtgtg
tgctaccataattttaatgacacgtgtgagaacgagctgtcctttaacatgacgaagaag
atgtgctgttgcgcctacaatgtgggaaaagcctggaacaagccgtgtgaaccctgtccg
acccctgctacctctgagtatgagctcctgtgtgggaacccagctccaggctttatcatc
gacatccacactggaaaacccatcgatattgacgagtgcagggagattcctgggatatgt
gcccatggagcgtgcatcaatcagatcggcagcttccgctgcgagtgtcctatgggcttc
agctacaacaacatcctgctggtttgtgaagatatcgatgagtgtaacagcggggacaat
ctgtgtcaacgcaatgccaactgcaacaacatccccggcagtttccgctgcgagtgctct
cctggcttcaagctgtcccccagtggagcgtgtgtggaccgcaatgaatgtctggaaatt
cccaacgtgtgcagccatggtgaatgcattgacacgcagggcagctaccgttgtctgtgc
cacaatggttttaaggccacagccgacctcacgatgtgcatggatattgatgagtgcgag
cggcagccatgtggaaacgggacatgtaagaacactgtgggctcctataactgtctttgc
ttcccaggctttgagctcacacacaataacgactgcatggatgtggatgagtgcactact
ctggctggtcaagtatgcagatatgggcagtgtatcaacagtctgggctccttccagtgt
ctatgtctggagggctatgagctcacccctgactctaagaactgcgttgacattaatgag
tgtgtgacgtacccgggcacctgctcacctggaacctgtcagaacctggatggatcgttc
cgctgtatctgtcctccgggttacgagttacagaatgagaactgtattgacattgacgag
tgtgaatcacagcccaacctctgtctgtttggccaatgttttaacaccccgggaagcttc
cagtgtacctgccaaccaggttttgttctgtctgataacaagcgtcgctgctttgacact
cgcaagagcttttgctttacacgtttcgaggccagcaaatgttccgttcccaaacctcag
aacatcagcaaggctgactgctgctgtagcctgatgcccggcgagggctggggtgacccg
tgtgagctctgcccccaggagggccaagctgcatttaaacagctgtgtccttacggtcat
ggagctgtgcctggactaggggaaggccgtgtcgatatgaatgagtgtttggataaccca
tgtaaaaatggtgcctgcatcaacactgacggttctttccgctgtgaatgtcccttcggc
tacaacctggattacactggaatcgaatgtgtggatacggacgagtgttcgatcgggaac
ccatgcggtaacggaacctgcacaaatgtggtgggaggctttgagtgttcctgtcaagag
ggttttgaacctggtcccatgatgacttgcgaagatattaatgagtgtacgttgaacccc
ctgctctgcgccttccgctgtgtgaacacattcggctcgtacgagtgcatgtgtccttca
ggctatgtgcttcgtgaggatcagagaatgtgccgagaccaggatgagtgttctgaggga
ctggatgactgtgaaagcaggggcatggtctgcaaaaacctcatcggcaccttcatgtgt
atctgtccaccaggaatgactcgacgcccagatggggagggctgtatggacctgaacgag
tgcagaagcaagcctggcatctgcaagaacggccgctgcgtgaacacggtgggcagctac
cgctgcgattgcaacgaaggattcgagtccagctccacgggcaccgagtgcatcgataat
cgtcaggactactgcttcactgaagttctgcagaccatgtgccagcaatcgtctaccaac
cgcaacaccgtcacaaagtccgagtgctgctgtaatggaggccgtggctggggacaacag
tgtgagctctgccccctgcctggcactgtgcagtacaaaaagatgtgtccacatgggcca
ggttacactaccgatggcagagatatcaacgagtgtaaggttctgcccaacctgtgtaga
aacggagagtgtattaacagcgtaggttccttccgttgccactgcaacgtgggctacacc
aacgacttcagcggaacctcctgcatcgatttggatgagtgttctcagtctcccaagccc
tgcaacttcctgtgtaagaacacagagggcagctacttgtgctcttgccctcgaggatac
atcctgcagccagatggaaagacctgcaaagacttggacgaatgctccaccaagcaacac
aactgccagttcctctgtgtgaacaccatcggaggcttcacctgcaagtgcccctctgga
tttacccaacaccaaaccgcatgtatcgataacaacgagtgtaccagccagcctagtatg
tgtggatcccgagcatcctgtctcaacacccccggcagtttttcttgtgagtgtcagaag
ggattttctctggacaccactggagtggagtgtgaagatgtggacgagtgcacagggaac
cacagatgccagcacggatgtcagaacatgatgggtgggttccgctgcggctgccctcaa
ggctacgttcagcactaccagtggaaccagtgcgtggatgaaaacgagtgtaacggcaat
cagatgtgtggttcggcctcatgctacaacactctgggcagctacaagtgtgtgtgtccg
tcaggatttgacttccagcagagtgcgggtggctgtcaggatgttaacgagtgcaccatg
tctagcaacccctgtacttatggatgctccaacacggatggtggttacctgtgcggttgc
cccggcggcttctacagagcaggacaggggcactgtatcacaggagcaggcttccagggt
cagtttggttctgaggaagatgaggacagcgctctttcgcccgaagcctgttacgagtgt
aagattaatgggaataaaggtggccgtcacaggcgcaatgctggagacaatgaactgaag
gagacagtgagcatggccagtgtagacactcaaaactccatccccatgaacctgtctctg
gcctcgctgcagaacagagaaccgctactggagctgcttccagccctggagcctctggag
caccacatccgatacgtgatcactcacggcaaccagggcgatcacttcaggctgctggaa
cggcgtgacggtaagacggtgctgcgcttgggccgtaagactcccccggctggtgcatac
cgcctcgagatcgcctcgctgcccctgtatggcccacgtcaactccgccagctggaggac
cagcatgacagtgactacctgctaggcgagatcggagatgcgctgcgcatcaagctgcac
atttacctgcactga
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integrated database retrieval system
