Clarias gariepinus (North African catfish): 128542698
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Entry
128542698 CDS
T10780
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128542698 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128542698 (arhgef18b)
Membrane trafficking [BR:
cgar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128542698 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
Sec20
PH_13
C1_2
PHD_2
Motif
Other DBs
NCBI-GeneID:
128542698
NCBI-ProteinID:
XP_053368630
LinkDB
All DBs
Position
15:complement(18126427..18192217)
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AA seq
1433 aa
AA seq
DB search
MRSSSSSSPDQFLSSTPEDQSSCLGESDFECGTDDLLDLNASLKDSEYFRDLQARPGGEC
EPSQSPLAVFIDTEDKPQLSPGLVFYPSPTLHCETYLENLSSSHSNTNLLSDQGEVMDLA
ESSDEMCLDDLNSDSFPILVRSMSTSRRHSSDVPLNPLGLGRRFSLDTRSVDSDGEQDDQ
SQSQSSVEEFTSCGEPELIKSPPSTQERMYSRSEIVSPVEKSQAERVSRILETSKQAARA
SGEEHDSDESLRSAEGQCHMANHRTSSADRKENVTWYEFLSIENEEEEERVERPEKGTKV
KRTLSSLRNRMTGSFNKDKGKNREKEQQKERDREREKEKERERELKGDTCTVSSSCNGHQ
LVRGSFSSRATCSLCSKTLQRKHGLQCVNCAVNVHKSCKSLLPECSNSKNKNKDFAQKSQ
TASQPCSQASREQCLTSDGAIRPAAGMTILPRGASGQQSAHSSNHTLSHTSSSSSITGEM
DEVDAFRIKRHTEDTISITPSTAESVIVEDAYYNNVRAELESLAQDFDVESWSLAVDQHF
LKKHSKEVIKRQDVIYELIQTEMHHVRTLKIMLLVYVHELRETLQLDERSLDCLFPQLES
LLKLHSHFLSRLQKRRQEMLEPGSDHNYVMHRVADIISDQFSGELGEMMKESYGVFCSHH
TEAVNYYKEQLQSNKKFQNHIRKINNLPIVRRLGVPECILLVTQRITKYPVLVERMLQYT
EAGSEEHEELAGAFVLIRNALVQVDAQVNLFEKETRLKEIAAKMEPKAFGKIKDGRIFRR
EDVTPSKRRLIHEGMVNWKAASGRLKDILAVLLTDVLLLLQDKDQRYVFSAVDGKPSVIS
LQKLIVREVAHEEKAMFLICASSNEPEMYEIHTASKEERNTWIAHIRQAVDSCPHTEERL
FTEEEGARLQRFRDIQEQLTVKDALIRQALTDKLHLYADLSECVGGLEDTRSQRHLLLRG
DASDLQQGEQLLKRALTEVENLQNVLVSGGHVFPQTEENQSSNSLPRRAGTFGGYDSSIS
PQHKHDSLKKQSIGAGKSRDRSQRASSDPQLKEMCLGQELEETDISLPSWNTNSSRFQNT
EFSSRVLLLSQQLYSLQAIVSQQDSLIELQRASLFSAERQRGTDVLLEQEKQRNLEKHRE
EMAHFQRLQAQQQQEQERWERERARQQKQHEAEQLRLQEREESCRKVEERLSQERQDLQN
QRQKYQQDLERLRESTRAVEKEREKLEQQRKMKKRNTAPITPTYGHDTAQLPLSSSFNGD
ILGNSGTDLALQSRSQLRSTVSLSTADYPERTDIPSRREGANTLPAKTEVPIHLVSTTNQ
QHKQGGVQQQIPTKLATLKSKDKSSKSKGSQRTDSSASIDMKQMLALKLSESSAKSRRSV
SPNQQPQLAQPPVTDPLSIGDKYIPEHLKAKNQSFPHSYPLPDEKDKEDVIFF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttcctcctcatcttcacctgaccagttcttaagcagcacacctgaagatcag
agttcttgtttaggtgagagtgatttcgagtgtgggacagatgacttattggacttgaat
gcttccctgaaagactctgagtatttcagagacctccaggccagacctggtggagagtgt
gagccttctcagagtcccctggctgtgtttattgacacagaggacaaaccacagctcagt
ccaggattagtcttctacccatcgcccacgctacactgtgaaacatacttagaaaacctc
tcgtcatcacacagtaacaccaacctgctgtctgaccaaggagaggtgatggatttggca
gagagttcagacgagatgtgcttggatgacttgaacagcgacagtttccctatccttgtc
aggtctatgtccacctcgcggagacacagctcagatgttccactgaatccactcggcctg
gggagaaggtttagtctggacaccaggagtgtagacagtgatggagagcaagatgaccag
agccagtctcagagctcggtggaggagttcacttcatgtggagaaccagagctcatcaaa
tccccaccgtccacccaagagaggatgtattccagatctgagattgtgtcgccagttgaa
aagtctcaagctgagagggtctcacgtatcctggaaacttccaaacaagcagcccgagct
tcaggagaggaacatgactcagatgagagtttacgctcagcagaaggacaatgtcacatg
gcaaatcatagaacctcaagtgctgacaggaaagaaaatgtcacctggtatgaatttctc
tccatcgagaatgaggaagaggaggagagagtggaaaggccagagaagggcactaaggtg
aagcgcaccctgagctcgttgagaaaccgaatgaccggatcatttaacaaagacaagggt
aagaaccgtgaaaaagagcagcagaaagagagagacagagagagggaaaaggagaaagag
agagaaagggagctgaagggggacacttgcacggttagcagcagctgtaatggccaccag
cttgtgcgtggctctttctcgagccgagccacatgctcactgtgcagcaagaccctgcag
aggaagcatggtctgcagtgtgtcaattgtgctgttaacgttcacaaaagctgtaagagt
ctcctgcccgagtgtagcaacagtaaaaacaagaataaagattttgcccagaagagccaa
acagcttctcagccctgtagtcaagcctcgagggagcagtgcctcacctccgatggcgcc
atccgcccggctgcaggcatgaccatcctgcctcgaggagccagcgggcagcaaagcgct
cacagcagcaatcacacgctcagtcacaccagcagctccagctctattacaggggagatg
gatgaagttgacgcattcagaattaaaaggcacacagaagataccatctctatcactcca
tctacagccgagtctgttatagtggaagatgcgtactacaacaatgtgagggcggagctg
gagtcacttgctcaggactttgatgtggagtcgtggagcttggccgtggatcagcatttc
ttaaagaaacattccaaggaagtgattaagagacaggacgtgatttatgagctgatccag
acagagatgcaccatgtgcgcacgctgaagatcatgctgctagtttacgtgcatgagctg
cgtgagactctgcagctggacgagcgcagcctggactgtttattcccacagttggaaagc
ctgctgaaattacacagccatttcctgtcccgcctccaaaagcgacgccaagaaatgctg
gagccaggaagcgaccacaactacgtcatgcacagagtggcagatatcataagtgaccag
ttttctggtgagctcggagagatgatgaaggaaagctatggcgtgttttgcagtcaccac
accgaagcagtcaactactacaaagagcagctgcagagcaacaaaaaatttcagaaccat
ataaggaaaataaacaacttgcccattgtccgacgactcggcgttcctgagtgcatcctg
cttgtcacacagcgcatcaccaaatatcccgttctcgtggagcgcatgctgcagtacaca
gaagccggctctgaagaacacgaggagctggcaggagcttttgttctgatcagaaatgcc
ctcgtgcaggtagatgcccaggtgaatctgtttgagaaggagacacgcctcaaagaaatc
gctgccaagatggagcctaaagcatttggcaagatcaaagatggacgcatctttaggagg
gaggatgtcacaccgagcaaacggaggctgatacatgaaggcatggtcaactggaaggcc
gcctccggcagacttaaggatatcctggctgtgctactcacagatgttctgcttctgcta
caagacaaggaccagagatatgtcttctctgctgtggacgggaagccatcagtgatctca
ctgcagaagctgattgtcagagaagtggcacatgaagaaaaggccatgttcctcatctgt
gcctcctctaatgagcctgagatgtatgagatccacacagcctcgaaagaggagcgcaac
acctggatcgcacacatcaggcaggccgttgacagctgtcctcatacagaggagagactc
ttcactgaagaggagggagcgagactgcaacgcttcagagacattcaagaacaactgaca
gtgaaagacgctctgatcagacaggctctgacagacaagctgcacttatatgcagacctc
tctgagtgtgtgggtggtttagaggacacaagaagtcagcgtcatctcttgctgcgggga
gatgcctcagatctccagcagggggagcaactgctcaaaagagccttaacagaggtggag
aacctgcagaatgttctggtgtcaggtgggcacgtctttcctcagacagaggaaaatcaa
agttccaactcgctgcccaggagagcaggaacatttgggggctacgacagcagcatcagt
ccacagcacaagcatgacagtttgaagaaacagtcaattggagcaggaaagtccagagac
aggagtcagagagccagttcagaccctcagcttaaagaaatgtgtctcggtcaagaactg
gaagagaccgatatttctttacccagctggaatacgaactcctccaggttccaaaataca
gagttttctagccgggttcttctgctttctcaacaactctacagtcttcaggcgattgtt
tcccagcaggacagcttgattgagctacagcgggcatctcttttctcagcagaacgacag
cgcggcacagatgtgctccttgagcaggagaaacagagaaacctggagaagcatcgtgag
gagatggctcatttccagcgtctacaggcacagcagcaacaggagcaagagcgctgggaa
cgcgagcgagcgaggcagcagaaacagcatgaggctgagcagctcaggcttcaggagcga
gaggaatcatgcaggaaggtggaggagagactttcccaggaaaggcaggatcttcagaac
cagaggcagaaataccagcaggatctggagagattacgagaatccacgcgggcagtggag
aaggagcgggagaaacttgagcagcaaaggaaaatgaaaaaacgcaatactgcacccatt
acaccaacatatgggcatgacacagcacagctccccctgtcctccagttttaacggtgac
atcctgggaaactctggaacagatctggccctccagtctcgctctcagctccgctccacc
gtctcgctatctactgctgattacccagagaggacagacattccttcacgccgggagggt
gccaacaccctacccgccaaaaccgaggtccctatccacctggtcagcaccaccaaccag
cagcacaagcagggcggagtccaacagcagattcccaccaagctggccacattgaagagc
aaggacaagagcagcaaaagtaaaggctcccagcgcacagacagctcagcttcaattgac
atgaagcagatgctcgctctgaaactgtcagagagttctgcaaaatctcgtcgctcggtc
agtccgaatcaacagcctcaacttgctcagcctccagttacagatcccctgtctattgga
gataaatacatcccagagcatctgaaagcaaagaaccagagctttccacattcctaccct
ctccctgacgaaaaagacaaggaggatgtcatctttttctga
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integrated database retrieval system
