Clarias gariepinus (North African catfish): 128542707
Help
Entry
128542707 CDS
T10780
Symbol
abcb11b
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128542707 (abcb11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128542707 (abcb11b)
04147 Exosome [BR:
cgar04147
]
128542707 (abcb11b)
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
128542707 (abcb11b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128542707 (abcb11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_29
ABC_ATPase
Rad17
AAA_15
AAA_16
AAA_30
AAA_7
Zeta_toxin
DUF1484
ACR_tran
Motif
Other DBs
NCBI-GeneID:
128542707
NCBI-ProteinID:
XP_053368649
LinkDB
All DBs
Position
15:8596651..8617637
Genome browser
AA seq
1350 aa
AA seq
DB search
MPGSVKLRSIKRFGHENNAYDFSNEEQNAEYMTIASSKKQKTSKPGQKKEEAAIRVGFFQ
LFRFATCREILMMIFGSLCAILHGSAQPLMLLVFGLLTDTFIDYDIELNELQDPAKHCLN
NTIQWRNLSAEENLELNMTRSCGLLDIEYEMTNFAYYYVGIGCAVFLLGYIQISLWVSSA
ARQIQIIRKLYFSKVMRMEIGWFDCNSAGELNTRMSDDINKINDAIADQVGIFIQRFTTF
VCGFLMGFVKGWKLTLVIISVSPLIGVGAGLMALFVAKLTGWELQAYAKAGSVADEVLSS
IRTVAAFGGEKKEVDRYDRNLISAQRWGIRKGLIMGFFTGYMWFIIFLCYALAFWYGSSL
VVDTEEYSPGTLLQVFFGVLIAALNLGQASPCLEAFAAGRGAATIIFETIDREPEIDCLS
EAGYKLDKVKGDLEFHNVTFHYPSRPEVKILDQMNLQVKSGETTAFVGPSGAGKSTAVQL
MQRFYDPKEGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLFATTIAGNIRYGRPGVSDSD
IIKAAKDANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMATS
ALDNESEAIVQEALDKVQMGRTTISIAHRLSTIKNADVIVGFEHGRAVERGKHDELMDRK
GVYFTLVTLQSQGDKALNQKAQQMEEEAAGDPEAEKKNLSRAGSYRASLRASIRRGAKSR
LSNIIPESSVPIAGELGPQSYSETYVSQELSKKGASPEDDDDEEVEPAPVARILKYNAPE
WPYMVFGSFGAAVNGGVNPVYSLLFSQILATFSMPDPGAQRREINGICLFFVLVGVVSFF
TQMLQGYAFSKSGELLTRRLRRLGFQAMLGQEVGWFDDHRNSPGALTTRLATDASQVQGA
TGSQIGMILNSLTNIGVALIISFYFSWKLSLVIICFLPFLALSGGFQAKMLTGFAKQDKQ
AMEAAGQISGEALNNIRTIAGLGKERSFVHMYEAQLEAPYQAALKKANVYGACYGFAQCI
VFLANSASYRFGGYLVRHENLHFSMVFRVISAIVTSGTALGRASSYTPDYAKAKISAARF
FQLLDRVPKISVYSDKGEKWADFKGEIDFTDCKFTYPSRPDIQVLNGLTVSVKPGQTLAF
VGSSGCGKSTSVQLLERFYDPDLGRVLIDGHDSTSINVPFLRSKIGIVSQEPILFDCSIA
ENIRYGDNRRELSMDDVISAAKKAQLHDFVMSLPEKYDTNVGSQGSQLSRGQKQRIAIAR
AIIRDPKILLLDEATSALDTESEKTVQEALDKAREGRTCIVIAHRLSTIQNSDIIAVMSR
GLVIEKGTHDQLMALNGAYYKLVTTGAPIS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctctgtgaagctgcgcagcattaagaggtttggacacgaaaacaatgcatac
gatttttccaatgaagagcaaaatgcagaatacatgacaatagcatcttctaaaaagcag
aaaacgtccaagcccggccagaagaaggaagaagcagccatccgtgttgggttctttcag
ctgttccgctttgccacatgccgagaaatcttgatgatgatctttgggagtttgtgtgct
atattacacggctctgcccagccactcatgctgctcgtgtttgggttgctgactgacaca
ttcattgactatgatatcgagctgaatgagctgcaagatccagccaaacactgcctaaat
aacaccattcagtggcggaacctctcagccgaggagaacttggagctcaatatgaccaga
tcctgtgggttgttagatatagagtatgagatgactaactttgcttactactacgttggt
attgggtgtgctgtcttcttgcttggatacatacaaatctctctgtgggtgtccagtgct
gctcgacagatccagatcatccggaagctgtacttcagcaaagtcatgaggatggagatc
ggctggttcgactgcaactccgcgggtgaacttaacacacgcatgtctgacgatatcaat
aaaataaacgacgccatagcggatcaggtgggaatctttattcagcgcttcaccaccttc
gtctgtggcttcctcatgggctttgtaaagggctggaagttgacactggtcatcatctct
gtgtctccactcattggagtgggagctgggctgatggctttgtttgtggctaagctaact
ggttgggagctgcaggcctatgctaaagcaggctctgtagcagacgaggtcctgtcctcc
atccgtaccgtggcagccttcggtggagagaagaaagaagttgatagatatgatcgtaat
ctgatctcagctcagcgctggggcattagaaaaggcctgatcatgggattcttcactggc
tacatgtggtttattatattcctctgttacgcactggcattttggtatggctccagttta
gtggtcgatacagaggagtacagccctggaaccctgcttcaggtattttttggtgtactt
attgctgcgttgaacctgggacaagcttctccctgtctggaagcgtttgctgcaggccga
ggcgctgctaccatcatctttgagactattgaccgtgagccagagatcgactgcctgtct
gaggccggctacaagctggataaagtgaaaggagatctggaatttcacaatgtgaccttc
cactatccatctagaccagaagtgaagatcctggatcagatgaatctgcaggtgaagtct
ggggagaccacagcttttgtgggaccaagtggggcaggaaaaagcacagccgtacagctc
atgcagcgcttctacgatcccaaagagggcatggtcaccctggatggtcacgatattcgg
ggtctgaatatccagtggctccgctcgctcatcggcatcgtggagcaggagccggtttta
ttcgccactaccattgcggggaatattcgctacggacgtcctggtgtatctgacagtgac
atcatcaaagccgccaaagatgcgaacgcctacaactttataatggacttaccacagaaa
tttgacacgctggttggtgagggtggtggacaaatgagtggtggccagaagcagcgaatt
gcaatcgctcgagctctggtgcggaatcccagaatccttctgctggatatggccacttct
gcactcgacaatgagagtgaagctattgtacaggaagcccttgacaaggtccaaatgggt
cgtaccaccatttccattgcccaccgtttgtcgacgataaagaatgcagatgtgattgtt
gggttcgagcatgggcgagctgtagagagaggcaaacatgacgagctgatggacagaaag
ggtgtatacttcactctggtcactttacagagtcagggagacaaagctctcaatcagaaa
gcccaacaaatggaagaggaagctgcaggagatcctgaagcagagaagaaaaatctttct
cgggcaggaagctaccgggcaagcctaagggcctctattcgtcgtggggctaaatcacgt
ctatccaacatcattccagaatcctcagtacccattgctggggaacttggacctcagtcc
tactctgaaacctacgtttcccaggagctgagtaaaaaaggtgcgagtcctgaagatgat
gatgatgaagaagtagaaccagccccggtagctcgcattctgaagtacaatgcccctgaa
tggccttacatggtttttgggtctttcggggcagctgtgaatgggggagtcaatcctgtg
tactctttgcttttcagccagatcttggcaacattctctatgcctgaccctggtgcccag
aggagggaaattaatggaatttgtttgttctttgtgttagttggtgtggtttcatttttc
acacaaatgcttcagggctatgcattttctaaatcaggggagttgctgacacgtagattg
aggcgcctgggtttccaagccatgttaggccaggaggttggctggtttgatgaccacagg
aacagcccgggtgctttgaccactagactggccacagatgcttcacaagttcagggagcc
acaggctcacaaattggaatgattttgaactctctgaccaacatcggcgtggccctcatt
atctccttctacttcagctggaagctcagcttggtcattatctgctttttgcctttcctt
gcactttctggaggcttccaggccaagatgcttactggctttgcaaagcaggacaagcaa
gccatggaagcagctggacagatatctggcgaggcgctgaacaacatccgcaccattgct
ggtctgggtaaagagcgcagttttgttcatatgtatgaagcacagcttgaagcaccgtac
caagctgcactaaagaaggctaatgtctacggtgcctgctatggatttgcccagtgtata
gtcttcctggcaaactcagcatcttatcggtttggcggatacttggtgcggcacgagaac
cttcatttcagtatggtgtttagggtcatctcagccattgtaaccagtggaacagcgctc
ggaagagcctcctcatacacacctgactatgccaaagcaaagatctctgcggctcgcttc
ttccagctgctcgaccgtgtccctaaaatcagtgtctatagtgacaaaggcgaaaaatgg
gccgatttcaaaggggaaattgatttcacagactgtaagttcacttacccgagccggcca
gatatccaggttttgaatggacttactgtaagtgtgaaacctggtcagactctcgctttt
gtgggtagcagcggctgtggcaagagcactagtgtccagctgcttgagagattttacgac
cccgacttaggacgagtgttaatcgatggacatgattctacttctatcaacgttccattc
ctgcgctctaaaatcgggatcgtttcccaagagccgattctgtttgactgcagcattgcg
gaaaacatccgttatggggataaccgcagggagctcagtatggatgatgtcatctctgca
gccaagaaggcccaactccatgactttgtcatgtctcttcccgagaaatatgacactaat
gtgggctcccaagggtcacaactctcacgtggtcaaaagcagcgcatcgccatcgccagg
gcaatcatacgagacccgaaaatcctcctcctggacgaggcgacatcagctctggacaca
gagagtgagaagacagtacaagaagctttggataaagcgagggaaggacgcacatgcatc
gtcatcgctcaccgtctctccaccatccagaattcggacatcatagcagtgatgtcacga
gggcttgtgattgagaagggcacgcacgatcagctcatggccttaaacggagcttattac
aagctggttacgactggagcaccgatcagctag
DBGET
integrated database retrieval system
