Clarias gariepinus (North African catfish): 128542715
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Entry
128542715 CDS
T10780
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128542715 (myo5c)
mRNA cycle factors
P-body specific factors
128542715 (myo5c)
Membrane trafficking [BR:
cgar04131
]
Others
Actin-binding proteins
Myosins
128542715 (myo5c)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128542715 (myo5c)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128542715 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128542715
NCBI-ProteinID:
XP_053368666
LinkDB
All DBs
Position
2:30948781..30967928
Genome browser
AA seq
1748 aa
AA seq
DB search
MALTELYTKYNRVWVPDAEQVWRSAEILRDYTPGDPALHLQLEDGAELQYPVEVDGQLPP
LRNPDILVGENDLTALSYLHEPAVLHNLRVRFVDSKIIYTYCGIILVAVNPYKQLHIYGD
AVIRAYSGQNMGDLDPHIFAVAEEAYKQMARNSKNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSNNTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSEKERNYHIFYQMCACADQPEFKSLRLLSADQFNYTCMGGETEIQGVDD
RADMAETCRTFTLLGLNSDFQSNVFKMLAGILHLGNVVIQAVGSDRSSVNSTDFHLAVFC
DLLEVREDNMRRWLCHRRIVLASETVIKPQPRERAINARDALAKHLYAYLFDRIILRINQ
ALRVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDNNWLQKLYNYLSSKPMFEKPR
MSNEAFVIHHFADRVEYQCKGFLEKNRDTLYEELVDIMRVSKFPLLADFFTEEEQNPVHA
AKGVKVKAARPGVKPANKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFE
YDSKRVVQQLRACGVLETVRISAQSYPSRWTYIEFYSRYSILMSQAELRLGEKKQTCRTV
LQRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDYLRTACVTIQKHVRGWTQRRRYLRMR
QAAIIIQQYIHGKRQIKRMVTAAALKQAWAAVVIQRHFRGYLVRRLYQLVLVATLTIQAY
TRGWIARKRYKKMVEEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSFRVQQLRKKLEE
QNKENRGLMERLTSLANAHAQGLEKVQSLEMELSKAANEKQCVEEREKRSKEESSRVIAQ
LQEEKDKVKQENQVLQAKLEDSIQQMTSNFEELKKKLIEDREREERLRKVAEHSSELQKE
DLDKEIAAIKEENRRLREEKIQLQAQTEDDTQVNKELQEQLSQLTKHVKVIPELHKQINS
LQNEKAEANRKMREQSEQTRAKMNMITRQLLGETKEDDTILRLTNEGSEADDDEGDLLFS
LNGIQNATRLVKTHLQEQKEGYESKLEALSFKNDHLSRENQQLQALFQEKSDINQSIGQE
VARLTSENMVIPELKQQVTELQRHKQELETHLQQQRTEMTENTTRISHELQRKLDEESSQ
RRLLENKNNENAREKEEMEKRLEELEEKIEQLKRLQQSDNEAKNKLRQETSRLTAENMDF
EEQLDTKDRTIKRLQDQIKALQAPVKASEKAGPTVPKEYLGMLEYKKEDEGRLVRTLVLE
LKPRGVVVNMIPGLVAHLLLMCIRHADYLNDGDKLKSLMQAIITGIKQVTTNHQENFEML
SFWLSNTYYLLNCLKQYSGEEEFMKHNTPRQNKNCLQNFDLSDYRQVFSDLAIQIHHQFI
NVMEDSLFPMIVPGMLEHESLQGISSMKPTGFRKRSNSVLDDGLREGQSQCYSVSSILQL
LSDFHSCMSQQGMDEQLKGQAFRQLFYLIGSTSLNSILLRKDLCSCRKGMQIRCNISYLE
EWLRDKGLQGYSVMETLGPLSQAAWLLQVNKTTDDDAAEIRQRCHELSPVQIVKILNSYT
PIDDFEKRVAPSFVRKVQTLLQEREGSTQLMMDAQYRFQVTFPFSPSTQALELLQLPISL
HLNFVTRL
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacggagctgtacactaagtataacagagtatgggtgccggacgcagagcag
gtgtggaggtcagctgagatcctgagagactacacacctggagatccagctctccacctg
cagctagaggatggagccgagctccagtatccagtggaggtggacggtcagttacccccc
ctccgtaacccagacatcttggtgggggagaatgacctaacggctctgagctatcttcat
gaaccagctgttcttcacaatcttcgtgtcagatttgtggactcgaaaataatctacaca
tactgtggcattatcctagtggccgtaaatccatataaacagctccacatttatggagac
gcagtcatccgtgcttattccggccagaacatgggggatctggaccctcatatatttgct
gtggctgaagaagcttataaacagatggcaagaaacagcaagaatcagtccatcatagtc
agtggggagtctggagcagggaagactgtgtctgctcgctatgccatgagatattttgcc
atggtcagcaaatctagcaacaacactcgcgtggaggacaaggttttagcatcaaacccc
atcactgaagcaataggtaacgcaaagacaaccagaaatgacaacagtagccgatttgga
aagtacactgaaatcagctttgaccgaagataccagatcatcggtgctaacatgaggacg
taccttctagaaaagtctagggttgtttttcagtcagagaaagagagaaactatcacatc
ttttatcagatgtgtgcatgtgcagatcaaccagagtttaaaagcttgagactgttaagt
gcagaccagtttaactacacctgcatgggcggggagacggagatccaaggagtggatgat
cgtgctgacatggctgaaacttgccgcactttcactctactaggactgaatagtgacttt
cagagcaacgtgtttaagatgttggcagggattttgcacttgggcaatgtggtgatccaa
gcagtcggctctgaccggtcatctgttaattctactgactttcacctggctgttttctgt
gacttgcttgaagtcagagaagataatatgcgccgttggttatgtcatcggcgtatcgtc
ctggcatccgaaactgtgatcaaaccgcaaccaagggaacgtgccatcaatgcccgtgat
gccctggccaagcatctttacgcttaccttttcgaccgtatcatcctgaggattaaccag
gccctgcgtgtacctggaaaacagcactcttttattggagtgctggatatctatggattt
gaaacctttgatgtaaatagctttgagcagttttgcattaactacgccaatgaaaaacta
cagcagcagttcaatttgcacgtctttaaactagagcaagaggagtacatgaaagaggac
atcccctggacgctgatcgatttctatgacaaccaaccagtcattgatcttatcgaagcc
aaaatgggcatcctggatttgctggatgaggagtgtctgtttcctcagggtactgataac
aactggctgcaaaagctttataactatctaagctcaaagcctatgtttgagaaacctcgt
atgtccaatgaggcatttgtgatccatcacttcgcagaccgggtagaatatcagtgtaaa
ggctttttggagaagaatagagataccctatatgaagagctggtggatataatgagagtc
agcaagtttcctctcttggcagatttctttactgaggaagagcaaaatcctgtgcatgca
gcgaagggggttaaagtaaaagcagcacgtcccggagttaaaccggccaataagcaactt
agaactactgtgggagataagtttcgcagttcactgtatctgttaatggaaactcttaac
gctactacaccgcattatgtccgctgcattaagcctaatgaggagaagctgccatttgaa
tatgactctaagcgggtggtgcaacagttgcgtgcttgtggagtgctagagactgttcga
attagtgctcagagttatccatctcgatggacgtacattgagttctacagccgttacagt
attctgatgagccaggctgaactcagattaggggagaagaagcaaacatgtagaacggtg
ttgcagaggctcatccctgactcaaatcagtacaagttcggaagaaccaaaatcttcttc
cgggcgggacaggtggcatacttggagaagctgcgtttggattacctgcgcactgcatgt
gttaccatccagaagcatgtgaggggttggactcagagacgcaggtatctgcgtatgaga
caagctgccatcatcatccagcagtacatccatggcaagaggcagatcaagcgaatggtg
acagcagcagctctgaagcaggcctgggcagcagtggtcatccagaggcactttcgtggc
tatcttgtacgccggctttaccagcttgtactggtggctacactcactattcaggcatat
accagggggtggattgcccgcaagcgctacaaaaagatggtggaggagcataaagctctg
gttctacagaagtacgctcgagcctggctggtgcggcgccgcttccagaccatgcgccga
cttgtcataaacgtgcagctgtctttcagagtccagcagctgcgtaagaaattagaggaa
cagaataaagagaatcgcggtctgatggagagactgaccagtctggccaatgctcatgct
cagggtttagaaaaggtgcagtccctggagatggagcttagcaaagcagccaatgaaaag
caatgtgtagaagagagagagaagagaagcaaagaggaaagcagtcgggtgattgctcag
cttcaagaagaaaaggataaagttaagcaggagaatcaggttcttcaggcgaaactcgaa
gattccatacagcaaatgacaagcaatttcgaagaactgaagaaaaagctcatagaagac
cgtgagagagaagagaggctgcgaaaagtcgcagaacacagcagtgagctgcagaaagaa
gacttggataaagagattgcagccataaaagaggaaaatcgcaggctgagggaagaaaag
atccagctacaggctcagactgaagatgacacacaggtcaacaaagagctccaggagcag
cttagtcagctcaccaaacacgtcaaggtgataccagagttacataagcagatcaacagc
ctccagaatgaaaaagctgaagcaaacagaaagatgagggagcagtcggagcagactaga
gcaaaaatgaatatgattactagacaacttctgggagagacaaaagaagatgacaccatt
ctcaggttgacaaacgagggcagcgaagctgatgatgatgaaggagatctgctgttttca
ttgaatgggatacagaacgccaccagactggtgaagactcatttacaagaacaaaaggaa
ggttatgaaagtaagctagaagcactgagttttaaaaatgatcacctgagtagagagaac
cagcagctccaagccctctttcaggagaagagcgatatcaaccaaagcattggacaggag
gtggcccggctcacttctgaaaacatggtgattcctgaactaaagcaacaggtaacagag
ttacagcgtcataaacaggagctggaaacacatctacagcaacaacgtactgagatgaca
gaaaatactacaaggatatctcatgagcttcagcgtaagcttgatgaggaaagctcacaa
agaaggcttttggaaaataagaacaacgaaaatgcaagagaaaaggaggagatggagaag
aggctggaggagctggaggagaagatagagcagcttaaaagactccaacaatcagacaac
gaagccaagaacaaactcagacaggaaacctcacgccttacagctgagaacatggacttt
gaagagcaattggatacaaaagacagaaccataaagaggctgcaggaccaaatcaaagct
cttcaggcaccagtgaaagccagcgagaaagctggaccaactgtcccaaaagaatacctc
ggcatgctggagtataaaaaggaagatgaaggcaggcttgtgcggacattagtacttgag
ctgaagccaaggggcgtagtggtcaatatgatccctgggttggtggctcatctcctgtta
atgtgcatccggcatgctgactatcttaatgatggagacaagctgaagtccctcatgcaa
gccatcatcactggaatcaaacaggtcaccacgaaccatcaggaaaactttgagatgttg
tccttctggctctccaacacatactatctgctaaactgcctcaagcagtacagtggagaa
gaagagttcatgaagcacaacacacctcggcagaataagaactgcttgcagaactttgac
ctctcagattacagacaggtctttagcgatcttgccattcaaatccatcatcagttcatt
aatgtgatggaggattccctgttcccgatgattgtgcccgggatgttggagcacgagagc
ctgcagggcatatcaagcatgaaacccacaggtttccgtaagcgctccaacagcgtactg
gacgacgggctcagagagggtcagagccagtgttatagtgtctcctccatcttacagctg
ctgagtgacttccacagctgcatgtcacagcagggcatggacgagcagctaaagggtcag
gctttccgccagctcttctacctaattggatccacctcacttaatagcatcctcctccgc
aaggacctctgctcctgccgcaagggcatgcagattaggtgtaatatcagttatttggaa
gagtggctgagggataaagggcttcagggctacagtgttatggagactctggggccgctg
tcccaggctgcctggctcctgcaggtgaacaaaacgaccgacgacgatgcagctgagatc
cggcagagatgccacgaactctcaccagttcagattgtgaagatcctcaactcgtacact
cccatcgatgactttgaaaagcgagttgctccgtcttttgtgcggaaagtccagacactg
ctacaggagcgtgagggctcgactcagttgatgatggatgcacagtatcgcttccaggtt
actttccctttctctccctccacacaagcactggagctcctgcagttgcccatcagcctt
cacttaaattttgtgacccgtctgtga
DBGET
integrated database retrieval system
