Clarias gariepinus (North African catfish): 128542760
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Entry
128542760 CDS
T10780
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128542760
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128542760
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128542760
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
128542760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
Dopey_N
MMS19_C
RTP1_C1
ParcG
TAN
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
128542760
NCBI-ProteinID:
XP_053368718
LinkDB
All DBs
Position
15:24253773..24323970
Genome browser
AA seq
1600 aa
AA seq
DB search
MEANMEYIVGLVMQKDLGRRLQVGQEIIDYILDRQKSHDLENDQTMLDRMVDGLATTWVN
SSNFKVALLGMDIVSALVTRLQNRFKPQIGTVLPSLTDRLGDAKDQVRDQAQTLLLKIMD
QAANPQYVWDRMLGGFKHKNNRTREAVCFCLVSTLNIYGAQGLTLSKIVPHICSLLGDPT
SQVRDGAMTCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSRFDEVQRSGNMVLSADKTV
DDDDSVDGGRSSASSKGATSVRRTGSMRRPSSASSTKSTGKESGAGVVDEEDFIRAFEDV
PTIQIYSSRELEDSMNKIREILSDEKQDWEHRVVALKKMRSLLLAGATNHETFLQQLRQM
EGAFKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNSAKVMATSG
IAAIRFIIRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTSCLDRHVAVLMD
TIKKGVHDADSEARSVARKCYWGFHGHFSKEAEQLFQALEQTYQKALQSHLKSSDSVMSL
PQSDRSSSSSQESLNRPQSAKAPVVSSVTRSKVVSAKVSSTPVSLQRSRSDVDVNAAATA
KSRMPKVPAAAQFSSAGALPPGSYASLGRVRTRRQSSGSSVGGGVSVTDSRGRSRAKVVS
QSQRSRSANQASVKTHAGSRSSSPGKLIGQSYGKTSSVTPAEKRSRIPRSQGCSRESSPG
RSGQVRGSRIPRPSMSQGCSRDTSRESSRDTSPARSFTPLVSRRQSRSTSALTGGDALQT
DRFGLIHQARISASVNAMRILNTGMEVEAAVADALLLGDSRNKRRPVRRWYESQGMYSDD
DANSDASSACSELSYSSRNGGVPHYMRQTEDVAEILNHCASSNWSERKEGLISLQNLLKS
QRTLSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFIVLHREDLQDWLFVLLTQLLKK
MGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLA
RQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHSWVSEELAGRLSSLTPLPVEGT
LEERCKQAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNAAATSSPS
NTVSRTPSRLSGSRTSPLTSPTNCSHGGLSPSRIWGWSSNGLSKAPCPFTPPSSGPGTPP
LRPGRRAPSLSMLEYDTENMNSEELYSSLRGVTEAIQSFSFRSQEDSYEPIKRDAKKDDA
SALASPAADPRLGTDVMEGGRMALDNKTSLLNTPSPRSFLGPRTREYNPYNYSDSISTYD
KAALKEAVFDDDVEQLRDGRRQEFGENKIMAPKSYSAGPAQHLELVGDLLKELSSHTERV
EERRAALLELLKVTRDDSVAVWEEHFKTMLLLLLETLADKDHTIRALALRVLKEILRSQP
ARFRNYAELTIMKTLEAHKDSHKEVVRAAEEAAATLASSIHPEQCIKVLCPIVQTADYPI
DLAAIKMQTKVIERIPEESLYQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEG
LKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDISSHS
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaatatggaatatattgtgggactggtcatgcagaaagacttgggacggcga
ctccaggttggacaggagatcatagactacattctggataggcagaagtcacatgatttg
gagaatgatcagaccatgctcgacaggatggtggacggcctggctacaacatgggtcaac
tcgagcaacttcaaggtggctcttctgggaatggacattgtgtctgctttagtgaccaga
ttgcaaaatcgctttaaaccccaaattggtacagtcctgcctagtttaacagaccgttta
ggtgatgccaaagaccaagtaagagaccaagcccagacactgctgttaaaaataatggat
caagctgccaatccacagtacgtatgggaccgaatgttgggaggattcaaacacaagaac
aacaggaccagagaggctgtctgtttttgccttgtttccacactaaatatatatggagcc
cagggtttaactctgagcaagattgtgcctcatatatgcagtctgttaggagaccctaca
agtcaggttcgagatggagctatgacctgtcttgtagagatttacagacatgtcggagag
agagttcgaatggatcttgggaaaaaaggcttgccacaatcacggttgaatgtaattttt
agcagatttgacgaagtacagcgatcagggaatatggtgctgtctgcagataagaccgta
gatgatgatgactctgtggatggaggacgttcatctgcttcctctaaaggagcaacgtct
gtccgcaggacaggatccatgcgcaggccgagctctgcctcgagcaccaagagcacagga
aaagagtcaggtgctggtgttgtggatgaggaggatttcatccgtgcctttgaggatgta
cccaccatccagatttactccagcagagagcttgaggattccatgaataaaatcagagag
atcctctcagatgaaaaacaagactgggagcacagagtggtcgcgctaaagaagatgcgt
tcgctgttgctcgctggcgccaccaatcatgaaacgttcctccaacaactgcggcagatg
gaaggagcgtttaagctctctgctaaagacctgcgctcccaagttgtccgtgaagcctgc
atcacattgggacatctgtcatctttgctaggtaataagtttgaccatggagctgagtcc
atcatgcccacgttgctcaatctcgtccctaacagcgctaaagtgatggccacatctggc
atagcagccatccgctttattatacgacacacacactatcctcggcttattcccatcatt
accagcaactgcacgtccaaatccgtggctgtccggcggcgctgttatgagtttttagac
cttttactccaggagtggcagacgagctgcctggacaggcatgtagctgttctgatggat
accattaagaaaggagtccacgatgctgactcagaagccagatccgtcgccagaaagtgt
tattggggattccatggccacttcagtaaggaggcggagcaactgtttcaggccctcgag
cagacctatcagaaagctctgcagtcacatctgaagagctcggacagcgtgatgtctctc
ccgcaatccgatcgctcctcctccagctctcaagagagcctcaatcgtccgcagtctgct
aaagcacctgtagtaagcagcgtaaccagaagtaaagtggtgagcgctaaagtttcctcc
acacctgtctcgctgcagcgatcacgcagcgatgttgatgtcaacgctgctgccaccgcc
aagtcccgaatgcccaaagtacccgctgctgctcagtttagctctgctggtgcactgcca
cctggctcctacgcctcgctaggccgggtgcgtacacggagacagagttcaggcagcagc
gtcggaggcggagtctctgttacagatagtagggggcggagccgagcaaaagtggtgtcg
cagtcgcaacgatccagatcagcaaaccaagccagtgttaagacccacgctgggagtcgt
tccagttcccctggaaagcttattggtcaatcctatggcaaaacgtcttctgtgacccct
gcagagaaacgcagtaggataccacgaagtcagggttgcagccgagaaagcagtcccggt
cgctccggccaggtgcgggggagtcgtatcccacggcccagtatgagtcagggttgcagt
cgtgacacaagcagggagagcagcagagacacaagtcctgcacggagttttactcccctt
gtgtctcggcgccagtcacgctccaccagtgccctgacaggcggcgacgccctgcaaaca
gatcgtttcgggctgatccatcaggcacggatctctgcttcagtcaatgccatgcgcatc
ctgaacacaggcatggaggtggaggcggctgtggctgatgctctgctattaggagactcc
aggaataagcggaggcctgtaaggcgttggtacgaatctcaaggcatgtactcggacgac
gatgctaacagcgatgcctccagcgcgtgttcagagctctcctatagctcgcgaaacgga
ggagtgccgcactacatgcgtcagacggaggacgtagccgagatcctaaaccactgcgcc
agttccaactggtccgagaggaaagaaggtctgattagcctccagaaccttctgaagagc
caaagaaccctcagccgtgtggagctcaagaggctgtgtgagattttcactaggatgttt
gccgaccctcacagcaaggtgtttagcatgttcctggaaacgcttgtggacttcatcgtg
ctgcacagagaggatttgcaggactggctctttgtgctcctcacacagctgttgaagaag
atgggcgctgatttgctgggttcggtgcaggccaaagtgcagaaagctctcgatgtcacc
cgggattcttttccgtatgatcagcagttcaacatcttaatgcgcttcattgttgatcag
acacaaactccaaaccttaaggtgaaggtggccattctgaagtatatcgagtccctggcc
agacaaatggatcccactgattttgtgaactccagtgagacgcgactagccgtctcccgc
atcatcacctggacgacggaacccaagagctcagatgtcagaaaaaccctgcacagctgg
gtaagtgaggagctggcagggaggctcagctcactcacccccctccccgtggagggcacc
ctggaggagagatgtaagcaggctgctcagattgtgctgatctccttgttcgagctgaac
acaccagagttcacaatgttgctgggagcactgcctaaaacctttcaggatggagccacc
aaactcctgcataatcacctgaagaactccagcaatgctgcagccacgagttcaccgagc
aacacggttagccgcacaccttcaagactctctggttcccgtactagtcccctgacatcc
cctacaaactgctctcatggaggcctctcacccagtcgtatatggggctggagttcgaat
ggtctttcaaaggccccgtgtcccttcactcccccttcctctggccctggtaccccccct
ctccgacctgggcgccgggccccctcgctcagcatgctggaatacgacacagagaacatg
aactcggaggagctctacagctctctgcgaggagtcactgaagccattcagagcttcagc
ttccgcagccaggaggacagctacgagccaatcaaacgtgacgccaagaaagatgatgct
agtgccttagcgtcacctgccgcagacccccgactaggtacagatgtgatggagggggga
cgaatggctctggacaataagacctcgttactgaacacaccgtcccctcgctctttcctg
gggccgagaacacgcgagtacaatccctataactacagcgactccattagcacttatgac
aaagccgctctaaaggaggcagtgttcgatgatgatgtggagcagctccgtgatggtcgg
cgtcaagagtttggtgaaaacaaaatcatggctcccaaaagttattctgcaggccctgct
cagcacttggagcttgttggtgacctcctaaaagagctgtccagtcacacagagcgtgtg
gaggagaggcgggccgccctgttggagctgttgaaggtgacccgtgatgacagcgtagcc
gtttgggaagagcattttaagactatgctactgctgctgcttgagacactggcggacaaa
gaccacaccattcgggcgctggctttgcgtgttctgaaagagatcctgcgaagtcaacct
gcacggttcaggaactatgccgaactgactattatgaaaacactggaggctcacaaagac
tcccacaaagaggtggtgcgtgctgcagaggaggccgccgccaccctggcttcctccatt
cacccggagcagtgcataaaggtgctgtgtcccattgtacagactgcagactaccccatc
gacctggctgccattaaaatgcaaaccaaggtcattgaacgcatcccggaagagtccctt
tatcagctgcttcctgacatcatccccggtctgctgcagggttatgataataccgagagc
agcgtgcggaaagccagtgtcttctgccttgtggcgatttattctgtgattggagaaggg
ttgaagcctcatcttgcccagctgacgggcagcaagatgaaactgctgaacctctacatc
aagcgagcccaaactaccaacagcaacagcagcagctcgtctgacatctcctcccacagc
taa
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