Clarias gariepinus (North African catfish): 128542868
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Entry
128542868 CDS
T10780
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128542868 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cgar03051
]
128542868 (psmd1)
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
128542868 (psmd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
Zip
Cnd1
PA26
SMYLE_N
NatA_aux_su
Tim54
Motif
Other DBs
NCBI-GeneID:
128542868
NCBI-ProteinID:
XP_053368982
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All DBs
Position
15:19050931..19095326
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AA seq
965 aa
AA seq
DB search
MITSAAGIISLLDEDEPQLKEFALQKLNSVVNDFWAEISESVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVTDDSEYVETIIAKCIDHYTKLRVENAELPE
DEEKKTIDPRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVSGLLAY
SLKICMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRVVGTPIPSVPGSTNTGTVPTQDKDNDAMET
DDKAGSSPAGKTTDVKDEPKDQNSKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYELLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGYKATINLLEPMTNDPVNYVRQGALIASALIMIQQSEVTCPKVNQFRQLYAKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSIVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPPLEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVETQETEKDKKDEEKEKEKEKKKEQEPNFQMLANPARVMPAQ
LRVLTMPENCRYQPFKPLHTGGIIILKDTSEEEEELVEPVSAHGPKIEEEEQEPEPPEPF
EYIDE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatctgccgctggaatcatatccctcttggatgaggatgagccgcagctaaag
gagtttgcgctgcaaaagctcaactccgttgtcaatgacttctgggctgaaatctcggag
tctgtggataaaattgaggtcctgtatgaagacgagacgttccgtagcagagcttttgca
gcattggtggcctccaaagtgttctaccaccttggtgcatttgaggagtctctgaactat
gctttgggtgctggagatctcttcaatgtcactgatgactctgaatatgttgaaacgatc
attgcaaaatgtattgatcactacacaaagctgcgtgtggagaatgcagagcttcccgag
gatgaagagaaaaagaccatcgatcctcgtctagagggcattgttaataaaatgttccag
cgatgcctagatgatcacaagtacaagcaggccattgggattgccctggagaccaggcgc
ctggacgtgtttgagaaaaccatccttgaatcgaatgatgtcagtggtctcctggcctac
agcctgaagatctgcatgtctctgatgcagaataaaaagtttcgtaacgaggttctcaga
gtgcttgttaaactctacatgaacctggaaaagcctgatttcatcaatgtttgccagtgc
ctcatattcctggatgaccctcaagctgtgagtgacattctggaaaagctggtgaaggag
gacaaccttttaatggcttatcagatctgctttgatttgtatgaaagcgcgagccagcag
ttcctgtcttcagttatccagaaccttcgcgttgtcggcactccaatcccttctgttccc
ggttccaccaatactggcaccgtgccaacacaggacaaagacaatgatgcaatggagaca
gacgacaaagctggcagttctccagctgggaaaactacagatgtgaaggatgaaccaaaa
gaccagaactcaaaaatgatcaagatcctcagcggtgaaatggccatcgagcttcatctg
cagttcctgattagaaacaacaacactgatttaatgatcctcaaaaacacaaaggatgcg
gtacgaaattctgtgtgccacacagcgacagttatagcaaactccttcatgcatacagga
accacaagtgatcagtttctcagagaaaatctggagtggcttgcaagagccacaaactgg
gcaaagttcacagccacagcaagtctgggtgtcattcacaaaggacatgaaaaggaagcc
ctgcagctgatggctacatacctgccaaaagacacgtcaccaggctccgcctaccaggaa
ggaggaggcctttatgcactcggactaattcacgccaaccatgggggggatattatcgat
tatctcctcagtcagctaaagaatgctagcaatgatattgtacgtcatggcggagctctg
ggtctcggcttagcagctcttggtacggctcgacaggatgtttatgaacttcttaaatca
aacctctaccaggatgatgcagtcacgggagaggctgcaggtctggcactaggtctggtc
atgctgggctctaaatcggctcaggctatcgaggacatggtgggttatgctcaggagaca
cagcatgagaaaatcctgcgtggcctggcggtgggcattgccctggtcatgtatggcaga
atggaggaggcggatgcgctcattgagagtctctgcagggacaaagacccaattctgcga
cgttctggaatgtacacagtcgggatggcttactgtggctcaggaaacaacaaggccatt
cgacgcctgctgcatgtggcggtcagtgatgtgaatgatgacgtacgcagagctgctgtt
gagtctatcgggtttatcatgttcaggactccagagcagtgtcccagcgtggtgtccctt
ctgtccgagagttacaacccacatgtccgctgtggagcagccatggctctggggatctgc
tgtgctggcaccggatacaaggcaacaataaacctactggagcccatgaccaatgaccca
gtcaactacgtgagacagggggctcttatcgcctcggccctcatcatgatccagcagagc
gaagtaacctgccccaaggttaatcagttccggcagctgtatgccaaagtgatcaacgat
aagcatgatgatgtcatggccaaattcggagccattttggctcaaggcattctggatgct
ggtggtcggaacgtgaccatctccctgcagtcacggactggacacacacacatgccctcc
atcgtgggtctgctcgtgtttacccagttctggttctggtttccactgtcccatttcctg
tctttggccttcacacccaccgccatcattggcctcaataaggacctgaagatgccgaaa
gtgcagtaccggtccaactgtaaaccctcgacttttgcttatcctcctcctctggaagtt
cccaaggagaaagaaaaggaaaaggtttccactgctgttctgtccatcaccgctaaagcc
aagaagaaggagaaagagaaggagaaaaaggagaaggaagaagagaagatggaagtggaa
acgcaggagacggaaaaagacaagaaagatgaggaaaaagagaaagagaaggagaaaaaa
aaggagcaggagcctaattttcagatgttggcgaatccagcgagagtgatgccggcgcag
ctccgagtgctaaccatgcctgagaactgtcgttatcagccatttaaaccacttcacaca
ggtggtattatcatcctgaaggacaccagtgaggaggaggaggagcttgtggaacccgtc
tctgcccatgggcctaaaatagaagaggaggagcaggagcccgagcccccggagccgttc
gagtacatagacgaatga
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