Clarias gariepinus (North African catfish): 128542899
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Entry
128542899 CDS
T10780
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128542899 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128542899 (efl1)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-60S particles
GTPases
128542899 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128542899
NCBI-ProteinID:
XP_053369035
LinkDB
All DBs
Position
15:20366624..20524376
Genome browser
AA seq
1105 aa
AA seq
DB search
MGHTSLEKIIALQKKTSNIRNICILAHVDHGKTTLADCLVASNGIISTRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYTTGDNEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLSPQESYTHLLKILEQVNAVTGTL
FTSKVLEERAVKEAQVQEEPPETDGGEQVYDWSSGLEETDDSHLYFSPDQGNVVFASAID
SWGFSVHQFAQIYSQKMGIRYELLQKTLWGDYYLNIKAKKIMKGAQSKGKKPLFVQLVLD
NIWSLYDAVVIRRDKEKVEKMVASLGLKVMARDLRHSDPKVLLSAICSQWLPLSRAVLSM
VCEKLPAPTEVISERVEKLMSVGTRRFDSLPEKTQQLKQAFLECSSEESAPVIVFVSKMF
AVDSKALPQNKQRPLTQEEIAQRRDLARQKHAERQAASQTSEIPETTNTTKQGPDELCVL
TEALAVKSTPEEEERETFVAFARVYSGIVRRGQKVFVLGPKYDPAITLQTLTDECSVPDS
MPAIPHLACCTLDRLYLLMGRELEELDEVPAGNVLGIGGMEEFILKSATISTSAACPPFT
PLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCVEVLIQESGEHVLVTAGEVHLQ
RCLDDLRERFAKIEISSSAPIIPFRETVIRPPKVDMVNEDLGRQQKVAVIHQTKEEQSKL
PEGVQIDSSGLVTLTTPNKMATIGVRAIPLPEQVTWLLEKNAELIRTMEHVNLLAREGKA
LEISSKTLEEIRNLKAELENHLQGHKWRNAVERIWAFGPRRYGPNILLNSVEGYQRPSVW
QVLNLEKEKSEGATLRDFDNSIGSGFQLATLSGPMCEEPLMGVCFSVESWDVKIPSQTVQ
KDSQDDTISQNTLEANNNEGELGEDGEAQSRRRDMADCYGPFSGQLIASMKEACRYAFQA
KPQRLMAAMYTCEIMATAEVLGRVYGVLSKREGRVLNEEMKEGSDVFIIRAVLPVAESFG
FADEIRKRTSGLASPQLVFTHWEVISSDPFWVPTTEEEYLHFGEKADSANQALKYVNAVR
KRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggggcacacaagtttagaaaaaatcattgcactacagaagaaaacgtcaaacattaga
aatatctgtattttggcccacgtggaccatggaaaaacgacactggcagactgtttggtc
gcaagcaacggcatcatttccactcgcttggcaggaaagctcaggtacctggacagccgg
gaggatgaacagatccgagggatcactatgaagtccagtgccatttctttacactataca
acaggagacaatgaatacctcattaatctgatcgactctcccggtcatgtggacttctcc
tcggaggtctctacagctgttcggctgtgtgacggagccatcgtgatcgtggacgcggta
gaaggagtgtgtcctcagacacaagcagtgttgaggcaggcatggctggagaacattcga
cctgtgcttgttatcaacaagattgaccggctgattgtggagctcaagctgagtcctcaa
gagtcctacacacacctcctgaaaattcttgaacaggtgaacgctgtgacaggcaccctg
ttcacttctaaagtgctggaggagcgtgcagtgaaggaggcacaggttcaggaagagcct
cctgagaccgatggaggtgagcaggtttatgattggagctcaggcctggaggaaacggat
gattcgcatctatatttcagccctgaccagggaaacgtggtgtttgccagtgcaatcgac
tcctggggtttcagtgtccatcagtttgcccagatctacagccagaagatggggattcgc
tacgagcttttacagaagactctgtggggagactactacctaaacatcaaggccaaaaag
atcatgaagggagcgcagtccaaaggaaaaaagccgctttttgtccagctggtcctggac
aatatctggagtttatacgacgctgtggtcatcagaagagacaaagaaaaggtggagaag
atggtggcttcattggggttaaaggtcatggcccgtgaccttcgtcactctgacccgaag
gtgctcctgagtgccatctgcagtcagtggttgcctttgtctcgggctgtgctctcgatg
gtgtgtgagaagttgccagctcccactgaggtgatctcggagagggtggagaagctgatg
agcgtgggtacacgcaggttcgactccctgcccgaaaaaacacagcagctgaaacaagca
tttttggagtgctcaagcgaagaatcggcgccagtcattgtgtttgtgtcgaagatgttc
gccgtggattcaaaggccctgccgcaaaacaaacaaaggcccctgactcaggaggagatc
gcccagcgtagagacctggccaggcagaaacatgcagaacgacaagcagccagtcaaacc
tctgaaatcccagagacaaccaacaccaccaagcaaggtcccgatgagctgtgcgtgtta
accgaagccctggcggtgaagtccacaccagaagaggaggagagagaaacctttgtagcc
tttgcacgtgtctacagcggaatagtgcgcaggggtcagaaagtgtttgtgctcggaccc
aaatacgaccctgccatcaccctgcagacgctgacagacgagtgttcagtccctgactcc
atgcccgccataccccacttagcctgctgcactctggatcggttgtatttgctgatggga
cgagagcttgaagaactcgatgaggttccagcgggcaacgttctaggaatcggtggcatg
gaggagtttattctaaagtcagcaaccatctcgacctcagccgcatgccctccgttcaca
ccgcttaacttcgaggccacgcctatcgtcagagtggcgattgagcccaaacatcccagc
gagatgcccaagctggtgcgggggatgcgtctcctgaaccaggctgacccgtgcgtggag
gttttgatccaggagagcggggagcacgtactcgtcacggctggagaggttcacctgcag
cgctgcctcgatgacctccgagagaggtttgccaaaattgagatcagttcctctgctccc
atcatcccattccgtgagactgtcatccgcccacccaaagtggacatggtgaatgaggat
cttggacggcagcagaaggttgccgtgatccatcaaaccaaagaggagcaatccaaactc
ccagaaggggttcagatagattcgagtggcctggtaaccttaactacccccaacaaaatg
gccacaatcggagttcgggctatccctctgcctgagcaagtgacctggctcctggagaag
aatgcagagctcatccgaaccatggagcacgtcaacctgctggcacgagagggcaaagct
ttagagattagttccaaaactctggaggaaatccgcaatttaaaggctgaattagaaaac
caccttcagggccacaagtggaggaatgcagtggagcgaatctgggcttttggaccgcgt
cgctacggccccaacattcttctgaacagcgttgagggataccaaaggccatcggtgtgg
caagttctcaatttagagaaggagaaaagtgaaggcgccacgctgcgagattttgataac
agcatagggagcgggttccagctggccacgctttcaggccccatgtgtgaagagccgctg
atgggcgtctgcttctctgtggagagctgggacgtgaaaatcccatctcagacagtgcag
aaggactcgcaggatgacacaatttctcaaaacactttagaggcaaataataacgagggt
gagcttggagaagacggcgaggcacagagccggcgtcgagacatggctgactgctacggg
ccattctcaggtcagcttattgcttccatgaaagaggcgtgcaggtatgctttccaggca
aaaccacagcgcctcatggctgcaatgtacacctgtgagatcatggctacagccgaggta
ttagggcgtgtgtatggtgtcttgtccaagcgtgaaggtcgtgtccttaacgaggagatg
aaggagggatcagacgtgttcatcatcagagctgttcttcctgtggccgagagcttcgga
ttcgctgatgagatccgcaagaggacgagcgggctggcaagccctcaactggtgttcact
cactgggaggtcatctccagcgatccgttctgggtgcccactactgaagaagaatatctc
cactttggagaaaaggcagattcggcgaatcaggcactgaagtacgtaaatgctgttcgg
aagcgcaaagggctttatgtggaggagaagattgttgaacatgctgagaagcaacgcact
ctaagcaagaacaaataa
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integrated database retrieval system
