Clarias gariepinus (North African catfish): 128542903
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Entry
128542903 CDS
T10780
Symbol
rx1
Name
(RefSeq) retinal homeobox protein Rx1
KO
K09332
retina and anterior neural fold homeobox protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128542903 (rx1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128542903 (rx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128542903
NCBI-ProteinID:
XP_053369041
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Position
15:15830499..15833908
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AA seq
332 aa
AA seq
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MHLSPLDTINMVDDSCPSPGNFHEMGKGRLVSVGTHVHSIDVILGFTKDPMPLLNPEVHI
VPPEVAVESSGDAGKQDHIVHTYGTVSTRDNSELPAFHDSGVLKTFSDSCEPEQKEVWKS
TVNDGKSQDHTHEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLP
EVRVQVWFQNRRAKWRRQEKMDTSVVKLHDSPMLSFSQPPMPTSMSPISDSLPLDPWLAS
PLTNTTSILAIPDLMGPAQGLQTGYQSQGFLNAPQIMNQTAQPVAPPPYQCPLAFTDKFH
LEKADQRCFSIAALRIKAKEHIQFMDKTWQTM
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcaccactagatactataaacatggtggatgacagctgcccctcgccaggc
aacttccatgagatgggaaaaggacggctggtgtctgttgggacacatgtccacagcatt
gatgtgatcctgggtttcacaaaggaccccatgcccttgctcaatccagaagttcatata
gtacctcctgaggttgctgtggaaagttcaggggatgcaggaaaacaagatcacattgtg
cacacttatggcactgtgtctacaagagacaactcagagctgcctgcttttcatgactct
ggagtactcaaaacattttctgacagttgtgagcctgaacaaaaagaagtgtggaaatca
actgtgaacgatgggaaatctcaagaccatacgcatgaggagcaaccgaagaagaagcat
cggcgaaaccgcaccacctttaccacataccaacttcatgagctggagcgagcctttgag
aagtctcattaccctgatgtgtacagccgtgaggagcttgccatgaaggtcaacctccct
gaggtccgagtacaggtgtggttccaaaaccgtcgtgccaagtggaggcgtcaggagaag
atggacaccagcgttgtaaagcttcatgactccccaatgctctctttcagccaaccgccc
atgcccacaagcatgagccccattagtgactcgctgcccctggatccctggctagcatct
cccctgactaacactacatcaatacttgctattccagacctcatggggcctgcacagggc
ctgcagactggatatcagagccaaggcttcctgaatgcaccacagatcatgaaccaaact
gcgcagccagtggcaccaccaccgtatcagtgccctctggcctttactgataaattccac
ctggagaaggctgaccaacgctgcttcagcatcgccgctctgaggataaaggccaaggaa
catattcaattcatggacaaaacatggcagactatgtga
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