Clarias gariepinus (North African catfish): 128542919
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Entry
128542919 CDS
T10780
Symbol
chrna4b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4b
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128542919 (chrna4b)
04082 Neuroactive ligand signaling
128542919 (chrna4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128542919 (chrna4b)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128542919 (chrna4b)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Claudin_2
Motif
Other DBs
NCBI-GeneID:
128542919
NCBI-ProteinID:
XP_053369072
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Position
15:complement(8459241..8465474)
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AA seq
612 aa
AA seq
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MNPARSIQLILILYLQCISVCTPAPARGHAEERLLQVLFQRYNKLSRPVQNISDVVFVHF
GLSIAQLIDVDEKNQMMTTNVWVKQEWSDYKLRWNPEEFENVTSIRIPSELIWRPDIVLY
NNADGDFAVTHLTKAQVFHDGRVKWKPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDR
AKIDLISMDSNVDQMDYWESGEWVIINAVGKYNSKKYECCTEIYPDITYYFIIRRLPLFY
TINLIIPCLLISCLTVLVFYLPSECAEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLI
GEYLLFTMIFVTLSIIITVFVLNVHHRSTRTHRMPNWVRQLFLHLVPRYLFMKRPPAAGK
RNCRKLIEMMHKPMAMQPIQQDNPPMTMPLDLCTVSAAPSCAIQREAASKSPLFCSSPSS
QYSILQEEPTLMNRTPGTQVNTSSTTSPSLSPDAPLGPLLRTLALSEICEYQCHSAESVF
VDTTEGSHETETLWHCHKHEETSIHTYFTADRGERKGSCGRHKVRGTQISNSNCCKESKM
EELPVSQSLLRALEGVQYIADHLRAEDSDFSVREDWKYVAMVIDRIFLWMFVLVCILGTA
GLFLPPWLAGMI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagccaggagcatccagcttatcctgatcctctacctccagtgcatctctgta
tgcacacctgctccggctcgtggccatgcagaggagcgactacttcaggttttattccag
cgctataacaagctctcacgtcctgttcagaacatctcagacgtcgtttttgtccacttc
ggcctttccatcgctcagctcattgatgtagatgaaaagaaccaaatgatgaccaccaat
gtttgggtgaaacaggaatggagcgattacaagctgcgctggaaccctgaggagttcgag
aatgtcacctccatcagaatcccctccgagctcatctggaggcccgatattgtgctctac
aacaatgctgatggagatttcgccgtgacccatttgaccaaagcccaggtgttccatgat
ggtagagtcaaatggaagcctcctgccatatataagagctcctgcagtattgacgtcacc
ttcttccctttcgatcagcaaaactgtaagatgaaattcgggtcttggacgtatgaccga
gccaagatcgacttgatcagcatggacagcaatgtggatcaaatggactactgggagagt
ggtgagtgggtcatcatcaatgctgtgggaaagtacaacagcaagaaatatgagtgctgc
acagaaatctacccagacattacatattactttatcatccgtcggctccctctgttctac
accatcaatctgatcatcccgtgcctgctgatctcatgcttgaccgtgctcgtgttctat
ctaccttctgagtgtgctgagaagatcacgctgtgcatatctgtgctgctctcgctcaca
gtgttcctcctgctcatcacagaaatcatcccttccacctcattggtcattccactcatc
ggtgagtacctgctcttcaccatgatctttgtcacactttccattatcatcactgtgttt
gtgctgaacgtccaccaccgctcaactcgcacacaccgaatgcctaactgggtccgccaa
ctctttctccacctggtacctcgataccttttcatgaaacgcccacccgccgcagggaag
aggaactgccgcaaactcatcgaaatgatgcacaagccaatggcgatgcagccaatccag
caggataacccccccatgaccatgccccttgacctgtgcacggtctctgctgctccatca
tgcgcgatacaacgtgaagcggcgtccaaatctcctcttttctgcagctcacccagcagt
cagtactccatccttcaagaggagcccacactcatgaaccgcactcctggcactcaagtg
aacacttcctctacaacaagcccttcgttgtctccagatgcaccgcttgggcctctgctt
cgaacattagccctgagtgagatttgtgaatatcagtgccacagtgccgagagtgtgttt
gtggataccaccgagggttcgcacgagacggaaactctttggcactgccataagcatgag
gagacaagcatacatacgtacttcactgcagatcgaggtgaaaggaaaggttcgtgtgga
cgacacaaggtccggggcacgcaaatctcaaattccaactgctgtaaagaatccaagatg
gaggaacttccggtgtcccagtcactcctgcgggccctcgagggagtccagtacatcgcc
gaccatctcagagctgaggattcagacttttcggtacgagaagactggaaatacgttgcc
atggtgatcgatcgaatattcctctggatgtttgtgttggtgtgcattttggggacagcg
ggactgtttctacctccttggttggccggaatgatctag
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