Clarias gariepinus (North African catfish): 128543007
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Entry
128543007 CDS
T10780
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128543007 (lrp4)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128543007
NCBI-ProteinID:
XP_053369252
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Position
15:2687882..2748192
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AA seq
1919 aa
AA seq
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MKLLPGLQLLTLCLCAQSVCGSTECSCGKNHFTCAVSVFGECTCIPAQWQCDGDNDCGDH
SDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHCQNG
YCIRSLWHCDGDNDCGDNSDEQCDLRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGTDEE
NCPADVMAATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSAEFMCNS
GMCINAGWRCDGEFDCDDQSDENNCTIPVCMAEQFRCASGRCVRLSWRCDGEDDCTDGSD
EEGCDKNGSVPSCASDQFQCGNGRCIGQRKVCNDVNDCGDGTDEHPHQECRPRSTEGNCN
VGNGGCSQKCQMSRGLVQCSCHTGYRLREDGKTCQDVDECAEEGYCSQGCTNTEGGFQCW
CVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHSR
ELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVAN
LDGSHRKVLIWESMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSGRRIIADTNLFW
PNGLTIDYAGHRMYWVDAKHHVIERADLDGKNRKAVISQGLPHPFAITVFEDSLYWTDWH
TKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGSNNGGCSHLCLPNSK
AYTCDCPTGFRKVDQHSCALSLDKFLLFARRTDIRRISFDTEDKSDDVVPLADVRNAVAL
DWDARDEKIYWTDVTTDSINRALWNGSEQEVVVDTSLESPAGLAIDWLTHKLYWTDAGTD
RIEVSNMDGSMRTVLIWENLDRPRDIVVDPLGGFMYWTDWGANPKIERAGMDASSRVVIV
STNLTWPNGLAIDYETQRLYWADASMKTIEFGNFDGSDRQVLIGTQLPHPFGLTLHEDKI
YWTDWQSKSIESADKLTGSGRRTLVDNLENLMDIHMFHRHREAVQTACSVKNGGCSHLCL
LAPAPKRSSCACPTGINLQGDGKTCTPGMNSFLIFARRTDIRMVSLDIPYFADVVLAVNG
SMKNTIAIGVDPREGKVYWSDSTLKKISRANMNGSGHEDVVSTGLMTTDGLAVDSVGRKI
YWTDTGTNRIEVANLNGSMRKVLVWKNLDSPRAIALYHEMGNMYWTDWGEHAKLERAAMD
GSDRVVLINNNLGWPNGLAIDKAGSQLLWADAHTERIEVADLSGSNRRTLVSPVQHPYGL
TLLGPHIYWTDWQSRSIQRADKNTGDNIITVRSNLPGLMDIQAMDRDRPLGFNRCGRNNG
GCTHLCLPRPNGTSCACPTGVLLKSDGRSCDDIPESYLLFSNRVSVRRISLDTSDHTDVH
VPVPELHNVISLDYDSVQGKLYYTDVSLDVIRRVNLDGSGMETVISQGLKTTDGLAVDWV
ARNMYWTDTGRNTIEVSRLDGSARKILINNSLDEPRAIAVFPSKGFLFWTDWGHIAKIER
ANLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLSGKLRQVLVTPVSH
PFALTQLKPVSSPLIRFSRISQQDRWIYWTDWQTKSIQRVDKHTGRNKETILANVEGLMD
IIVVAPNRQYGTNHCGVNNGGCTHLCLAKANGFVCACPDEPDERPCSTIAGFVPVVPDKV
TAGTQAPNRRGRLPTDKPPQGRPGQNCTEKSGAGDGCTQSNVVSAPHGEGLHISYVIGGA
LTVLAILILIAVFIIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIETMQKPPIYNQLR
YKKEQEAGYTNEKIRIVEGVCLLSGEELYWEDLKQLKMCRGGTFKTCMRTDTVSLQASSA
SLQASSASLDDTETEQLLQGDQSECSSLNTAPVATPKRHSTLPDTGWAPNRKPSTESEV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctccccggactgcaactcctaactttgtgtctctgcgctcagagtgtgtgt
ggaagtacggagtgttcatgtgggaagaatcacttcacgtgtgcggtcagtgtgtttggc
gagtgcacctgcatcccggcgcagtggcagtgtgatggagacaacgactgcggagaccac
agcgatgaggatggctgcatgctgcccacttgctctccactggatttccactgtgataat
gggaagtgtatccgccgctcgtgggtgtgtgacggagacaacgactgtgaggatgattcg
gacgagcaggactgccctcctcgcgagtgtgaagaggacgagtttcactgtcagaacggt
tactgcatccgcagcctgtggcactgtgacggagacaacgactgcggagacaacagtgac
gagcagtgtgacctgaggaagtgttcagataaggagttccgctgctcagatgggagctgt
atagccgagcactggtactgtgacggggacacggactgtaaagacggaacggacgaagag
aactgccccgcagacgtcatggccgctacatgtagtgtggaggagttccagtgtgcgtac
ggtcgctgcatcctggacatttatcactgtgacggagacgacgactgcggggactggtct
gatgaatctgactgctcctctcaccagccgtgtcgttcggctgagttcatgtgtaacagt
gggatgtgtatcaacgccgggtggagatgtgatggagagttcgactgtgacgatcaatca
gacgagaacaactgcaccatccctgtgtgtatggctgaacagttccgctgtgcgtccggt
cgctgtgtgcggttgtcatggagatgtgatggtgaggatgactgcactgacggcagcgat
gaagagggctgtgacaagaatggctcggttccctcctgcgcgtccgatcagttccagtgt
ggaaacggtcgctgcatcggccaacgcaaagtgtgtaacgacgtcaacgactgtggagat
ggaacagatgaacacccgcaccaggagtgccggccccggtcgactgaggggaactgtaac
gtggggaacggcggctgctctcagaagtgtcagatgtctcgaggtttggttcagtgcagc
tgccacaccgggtacagactgagagaggacggaaagacctgccaagatgtggacgagtgt
gctgaggaaggttactgcagtcagggctgcaccaacaccgaggggggcttccagtgctgg
tgcgttcagggctacgagctcaggcctgacaagcgcagctgcaaagctctgggtccagag
ccggtgttgttgtttgcgaaccggattgatatccgccaggttctgcctcaccgctcggag
tacacgctccttctgaacaacctggagaacgccatcgcgctggacttccaccacagcaga
gagctggtgttctggtccgacgtcacgctcgaccgcatcatgaaagccaacctgaacggc
agcaacgtggaggaggtggtttccacgggcctcgagagtccaggtggtctggcgatagac
tggatccacgacaagctctactggacggactcggggacgtcacggatcgaggtagccaac
ctcgacggctcacaccgcaaagttctgatctgggagagcatggagaagccccgggccatc
gctctgcaccccatcgaagggaagatttactggacggactggggtaacaccccgaggatc
gagtacgcaaacatggacggctcgggacgcaggatcatcgccgacaccaacctgttctgg
ccgaacggactcaccatcgactacgccggccaccgcatgtactgggtggacgccaaacac
cacgtgatcgagagagccgacctggacgggaaaaaccgcaaagccgtcatcagccaaggt
ctcccgcacccgtttgccatcacagtgtttgaggacagtctgtactggaccgactggcac
accaagagcatcaacagtgccaataagttcacgggcaaaaaccaggaaatcatccgtaac
aaactgcacttccccatggacatacacacgctgcacccgcagagacagcccgcaggtgga
cggaatcgctgcggctctaataacggcggctgtagtcacctgtgtctcccgaacagtaag
gcgtatacgtgcgactgtcccaccggcttcaggaaagtcgaccagcacagctgtgccctg
agtctcgacaagttcctgctttttgccagaaggacggacatccgtcgaatcagctttgac
accgaggacaaatcggacgacgtcgtgcccctggcggacgtccggaacgccgtagcgctc
gactgggacgccagagatgaaaagatttactggactgacgtcaccactgactctatcaac
cgcgcgctgtggaacggatcagaacaggaagttgtagtggacaccagtctggaaagccct
gctggtctggctatcgactggctcacacacaaactctactggactgatgcaggtaccgat
cgcattgaggtgtccaacatggacggcagcatgcgcaccgtgctcatttgggagaatctg
gatcggccgcgcgatatcgtggtggatccgctcggagggttcatgtactggacggactgg
ggggcgaaccctaaaatcgagcgagccggcatggacgcgtccagtcgcgtggttatcgtt
tccaccaacctgacgtggcccaacgggttagcgatcgattacgagacgcagcggctctac
tgggccgacgccagcatgaagaccatcgagttcggcaacttcgacggctcggacagacag
gtgctgattggcacccagctgccacacccgttcggcctcacgctgcacgaggataagatc
tactggacagactggcagtccaagagcatcgaaagtgcagacaagttgaccggctcggga
cggagaacgctagtggacaatctggagaacctcatggacatccacatgttccacagacac
cgagaagcagtccagacggcgtgctcggtgaagaacggaggctgtagtcacctgtgtctg
ctggctcctgctcctaaacgctccagctgcgcctgtcctaccggaataaacctgcagggg
gacgggaaaacctgcacgccaggaatgaacagcttcctcatcttcgcacggaggacagat
atccgcatggtctctctcgacatcccgtatttcgctgatgtggttctggccgttaatggt
tccatgaagaacaccatcgccatcggcgtggatcccagagagggtaaagtgtactggtca
gacagcacactgaagaagattagcagagccaacatgaacggctccgggcacgaagacgtc
gtttctacaggtctgatgacgaccgatggtctcgctgtagactcagtaggaaggaaaatc
tactggacagatacgggaacgaaccgcatcgaagtggccaatctgaacggctccatgagg
aaggtcctggtgtggaagaacctggacagcccgcgggccatcgctctatatcacgaaatg
ggcaacatgtactggacagactggggcgaacacgccaagctggagcgagcggcgatggac
gggtccgaccgtgtagttttgatcaataacaacctgggctggccaaacggactcgccata
gacaaggctgggtcacagctactctgggccgacgcccacacagagcggatcgaagtggca
gatctgagcggctcgaaccgcaggacgctggtttctccggtccagcacccctacggtctt
acgctgctcgggccacacatctactggactgactggcagagtcgcagcatccagagggct
gacaaaaacacaggggacaacatcatcacggtccgctccaacctgcccggactcatggac
atccaggccatggacagagacaggcctctgggttttaaccgctgtggtcggaataacggc
ggctgtacccacctgtgccttccgcgtccaaacggcacgtcgtgcgcctgccccacaggc
gttctcctgaagagtgatggcaggtcatgtgacgacattcccgagtcctacctgctcttc
tccaaccgcgtcagcgtgcggcgtatctcactggacaccagcgaccacacagacgtccac
gtcccagtccccgagctgcacaacgtcatctcgcttgactacgacagcgtccagggcaaa
ctgtactacactgacgtctcactggacgtgatcaggcgggtgaatttggacgggagcggg
atggagacggtaattagtcagggcctgaagactacagacggcctggccgtggactgggtg
gccagaaacatgtactggactgacacgggtcggaatactattgaggtttccagactagac
ggatcagcacgaaagatcctgatcaacaacagcctggacgagccacgagccatcgctgtg
tttcccagtaaagggtttctgttctggacagactggggtcatatcgctaaaatcgagcgt
gctaatctggatggttcggaccggaaagttctgatcaacacagacctcggctggcccaac
ggcctgacgctcgattacgacacgcgcaggatcttctgggtggacgcgcacctggaccgc
attgaaagttctgacctgagtggaaaactgcgccaagtcctggtgactcctgtgtcgcac
ccgtttgcactcactcagctgaagccggtttcctctcctctaattcgtttttcccgcatc
tcacagcaagaccgctggatctactggaccgactggcaaaccaagtcaatccagcgagtg
gataaacacacgggccggaacaaagagaccatcctcgctaacgtcgagggcctcatggac
attatagtggtggcaccaaaccggcagtacggaacgaatcactgtggtgtgaataacgga
ggctgtacacacctgtgtcttgccaaggctaacgggtttgtgtgtgcgtgtcctgacgag
ccagacgagcgcccgtgctccaccattgctggttttgttcctgtcgtgccggacaaagtg
accgccggcactcaggctccgaacagacgcggcagactgcccacagacaaacctccgcag
ggccggcctggacagaactgcacagagaagagcggcgctggagacggctgcacgcagagt
aacgtggtgtctgcgccccacggtgaaggtcttcatatcagctacgtgatcggaggcgca
ctgacggtgctagccatcctcatcctcatcgccgtcttcatcatttacaggcacaaaaaa
tccaagttcgctgatcctggagtgagcaacctgacgtacagtaacccttcctacagaacg
tccacacaggaagtgaaaatagaaaccatgcagaaaccacccatatacaaccagctacga
tataaaaaagagcaggaggccggttacaccaacgagaagatccgtatagtggagggggtg
tgtctcctctcgggggaggagctttactgggaggacctgaagcagctgaagatgtgccga
ggaggaacctttaaaacctgcatgcgcacagacaccgtgtccttacaggcaagctccgcc
tccctccaggcaagctccgcctctttggacgacactgagaccgaacagctgcttcaaggc
gaccaatcagaatgctcgagtctaaacacggcccctgtggccacgcccaaacggcacagc
acgctcccggacacgggctgggctccgaaccgcaaaccttcgaccgagagcgaagtgtaa
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