Clarias gariepinus (North African catfish): 128543073
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Entry
128543073 CDS
T10780
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128543073 (ddx49)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128543073 (ddx49)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
90S particles
Helicases
128543073 (ddx49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
128543073
NCBI-ProteinID:
XP_053369362
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All DBs
Position
15:10539738..10545224
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AA seq
477 aa
AA seq
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MATFASLGLSEWLVDQCKQMGITRPTQVQEHCMPAILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRALGKPLGLRDCIIVGGMDMVTQGLELSRK
PHVVVATPGRLADHIRSSGTFDMKRLRFLIMDEADRLLEQGCTDFTKDLEVILSIVPAKR
QTLLFSATLTDTLQELKSIAMNKPFFWEHKSEVRTVEELDQRYILTPEKVKDAYLVNIIQ
KFQDEHDDWSIMIFTNTCKNCQILTMMLREFKFPAIALHSMMKQRQRFANLAKFKSNIFK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
NAIEEQIQAKLKEYPVQEKEVLKILTQVNVTRRQCEIKLEATDFDEKKEINKKKQMILEG
KDPDLEEKRKNELAKLKREKKKFKGRIQEAIQKKKGKMLKKRAKSDKTQSHSVPGPS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttttgcgtctcttggcctgtccgagtggctggttgatcagtgtaaacagatg
ggaatcacccgaccgacccaggtgcaagaacattgcatgcctgctattttggaaggccgt
gactgtatgggctgtgcgaaaactggaagcggaaaaacagcagcgtttgtgctgccggtg
ctgcagaagttgtccgaggatccttacggcatcttctgcttggtgttaacgcctacaagg
gaactggcttatcagatagcagaacagttccgggcgttgggaaagcctctgggactgaga
gactgtatcattgttggaggaatggacatggtgactcagggtctggagctttccagaaag
ccacacgtcgtcgtcgccacccctgggagattagcagatcacattcgcagttcgggcacg
tttgatatgaagagacttcgattcttaatcatggatgaagcagatcgtttgctggagcaa
ggctgcacagacttcactaaggatctggaggttattctcagcattgtaccggcgaaacgg
caaacgctgcttttcagtgcaacgctgacggatacgctgcaggagcttaagagcattgct
atgaacaagccattcttttgggagcacaaatccgaagtgcgaacagtagaagagctagat
cagcgatacatccttacacctgagaaagtcaaagatgcctacctggtgaacattatccaa
aaatttcaagacgaacacgacgactggtcgatcatgatttttaccaacacttgcaagaat
tgtcaaatactcacaatgatgctgcgtgagttcaaatttcctgccattgccttgcattcc
atgatgaaacagagacaacggtttgcaaaccttgcgaagttcaagtccaatatcttcaag
atccttatagcaacggatgtagcagccaggggtttggatatacctacagtgcaggttgtc
atcaaccataataccccaggattgccaaaaatctacattcacagagtgggcagaactgca
cgtgcaggaagaaatggtgtttccattacactggtcacacagtatgacattcatttagtc
aacgctattgaggagcagattcaggccaagctgaaagaatatccagttcaagagaaagaa
gtgctaaagattcttacccaagtcaacgtgactagacgacagtgcgagattaagttggaa
gcaacagattttgatgagaaaaaggaaatcaacaaaaagaagcaaatgattcttgaagga
aaggaccctgacttggaagagaaaagaaagaatgagcttgccaaactaaaaagagaaaaa
aagaaatttaaaggaagaattcaggaagccatacagaagaagaaaggaaagatgctgaaa
aaaagagcaaagtctgataaaactcaaagccacagtgttccaggaccctcctga
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