Clarias gariepinus (North African catfish): 128543077
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Entry
128543077 CDS
T10780
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128543077 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128543077 (grin3bb)
04082 Neuroactive ligand signaling
128543077 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128543077 (grin3bb)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128543077 (grin3bb)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
128543077
NCBI-ProteinID:
XP_053369366
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Position
15
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AA seq
1118 aa
AA seq
DB search
MHLICPGLLVYFFYFGLYQETLVPVHSHPQPCRVLAQVGHTVRLGVLLPSRRPMRVRAAL
DRALGAIAASGDNFLPYNLSLDVVAREPTDGDPESLFRCVCQSIVVQGVSAVLAFPQSRN
ELMQVEFMSSFLEIPFVSIIEQGEPLKTENRFHLQMMTRIPASDLAELLLLVMQRSGWHE
GMAVLCQGWEEAGLLDLLKLHGSTAKGNSRWILRAALNLSGSSLDQRGISEFLEQHFSQD
PHPPASVLLLGSDPQCASAVLRSAHDLGLTLPTMHWIMGYPLSPDALHSIGLPLGLLAYG
EVDRKPLDFYIHDTLQLISRAVAAATLVRPDLALIQNMVNCFDKPNKHELPSSGQYIARF
LSNTTFMGMTGAVSVQRNMSRVFTSHRVHIWRLRRDAVGQPAWVTVGSWEGTQLDVEERG
LWESSTPRQRAEAQRGREGSRWRPGFPVSGSRVRVVTLVEHPFVFTREVDEDGNCPAGQY
CLDAGTNSSDILDNVFAMRAQGNKTFLPADYSKCCYGYCIDLLEKLAEDMDFEFDLYIVG
DGKYGAWKGGRWTGLVGDLLNGVADMAVTSFSINSARSKVMDFTSPFFSTSLGILVRSKD
TAAPIGAFMWPLHWSMWVGIFVALHMTALFLTLYEWKSPFGMTPHGRNRMKVFSYSSALN
LCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEVSGIH
DAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPEGVATLKTDPPQLDA
FIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNISEFISRYKSDGYMD
MLHDKWYKVVPCGKRVFAMTETLQMGIQHFSGLFVLLCVGVTGALLTLIGEHAFYRLVLP
HIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRANTEKSCNIQKSQPAQPPPPPPPGTFA
KWNNESSRAAKELKDNKRVHFNLETLNTRRLLARVVAEGGQGTSGSATGTGSSSGPAPGG
GQVLRVCENGGPVPLQPLPSSSPPHLTEPPKDGELEELQEKIEEIRGQLRDALARRAQLQ
TALAKERAAAVIPLTQEGPPTVTATICRSLVKDLEGKR
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgatctgccccgggctcttggtgtacttcttctacttcggattgtaccaggag
acgctcgtgccggtccactcgcacccgcagccgtgccgcgtgctcgcccaggtcgggcac
accgtgcgcctcggcgtgctcctgccctcccggaggcccatgcgcgtgcgagccgcgctg
gaccgagcgctcggcgccatcgccgcgagcggagacaacttcctgccctacaacctgagt
ctggacgtggtggcgcgcgagccgaccgacggtgaccccgagtctcttttccggtgcgtg
tgccagtccatagtggtgcagggggtctccgcggtgctcgcgttcccccagagccggaac
gaactcatgcaggtggaatttatgtcgtcgtttttggaaatccccttcgtgagcataatc
gagcagggagagccgctgaaaacggagaaccggtttcacctacagatgatgacacggatc
cctgcgtcagacctggccgagcttctgttgctggtgatgcagcggagtggttggcatgag
ggcatggccgtactctgccagggctgggaagaagctggccttctcgaccttttaaaactg
cacggtagcacagccaagggcaactctcgctggatccttcgtgctgcccttaacctctcg
ggtagttcactagaccaaagaggcatatcggaattcctggagcagcatttcagccaggac
ccccatccaccagcctctgtgctgctactagggtccgatccacaatgcgcttctgcggta
ctgcgcagtgcccatgacctgggtctaacactgcccacaatgcattggattatgggatat
ccgttaagtccggatgccttgcattccattggcttaccactggggctgctagcctatggc
gaggttgaccgcaaacctctggacttctatattcatgacacgttacagctgatcagtcga
gcagttgctgctgccacgcttgtgcggcctgatcttgcgctcatccaaaacatggtgaat
tgtttcgataaacccaataagcatgaactgccttcatctggacagtacattgccaggttt
ctctccaacacaaccttcatggggatgactggtgcagtcagtgtgcagcggaacatgtca
cgtgtgtttacatctcaccgggtgcacatctggagacttcggcgtgacgctgtgggccag
ccggcctgggtgacagtgggtagctgggagggcacccagctggatgttgaggagcgaggt
ctgtgggagagctcaaccccgcggcaacgcgccgaggcacaaagaggtcgtgagggcagc
cggtggcgacccggcttccctgtttcagggagccgtgtgcgtgtggtcaccctcgtcgag
cacccgtttgtgttcaccagggaagtggacgaggatggcaactgtccagctggacagtac
tgcttggatgcaggtaccaacagctcggatatactggataatgtttttgccatgcgagca
caagggaataagacgtttcttccagcggattacagcaagtgctgctatggatactgtatt
gacctgctagaaaagctggccgaggacatggactttgaattcgacctttacattgtggga
gatgggaaatacggtgcatggaaaggtggccgttggacagggctggtcggagacctgctt
aatggcgtggctgatatggccgtcaccagcttcagcatcaactcggcacgtagcaaagta
atggactttaccagcccgttcttctccaccagcttaggcatcctcgtgcgcagcaaggac
acggcagcacccattggagctttcatgtggcccctacactggtccatgtgggtgggcatc
tttgtagcactgcacatgacagcactcttcctcaccctctatgagtggaaaagcccattt
ggcatgactccacatgggcgtaaccgcatgaaggtgttctcctactcctcagcccttaac
ctgtgctacgccattctgtttggccgcacggtatcgagtaagacgcccaagtgctggaca
ggacgattcctcatgaacctgtgggccatcttttgcttgttagttttgtccagttacaca
gctaaccttgctgcagtcatggttggggaaaagacctttgaagaggtttcgggcattcat
gatgccaaactccatcacccttcccaagggttccgttttgggaccgtacgtgaaagcagt
gctgaggactacatgaagaaaagcttccctgaaatgcatgaatatatgaggagattcaac
gagccaaccaccccagagggagtcgccactctcaagacagatcctcctcagcttgatgct
ttcatcatggacaaagctttgctggactatgaggtatccatcgatgccgactgtaagctg
ttgactgttggcaaacccttcgctattgaaggttatggaatcggcctgccccagaactcg
cctctcacgtccaacatttcggaattcatcagtcgctacaaatccgacggctacatggac
atgctgcacgacaagtggtacaaagtggtaccctgtggaaagcgagtcttcgccatgacg
gagacgctgcagatgggtatccagcatttctcagggctgtttgtgttgctgtgtgtaggc
gtgactggggcgttactcactctcataggtgaacacgccttctaccgcttggtcctgcct
cacattcgccgtcggcagaaattcaagtactggctccataccagtcagaaaattcaccgg
gcactgaatatgacttatgaggacgtaaaacgacagagagccaacacggagaaaagctgt
aatatccagaagtcccagccggcacaacctccaccacctccgccgccggggaccttcgcc
aagtggaataacgagagcagccgtgccgcaaaagagctcaaggacaacaagagggttcat
tttaacctggagacgttaaacacacgccgcctccttgcccgcgtagtcgcggaaggcggt
cagggaacttctggatccgcaacgggaaccgggtccagctctggaccggcacccggtgga
ggtcaggtgttgagagtgtgtgaaaacggtggcccggtgcctctacagccactcccttca
tcttctccacctcatttgactgagcctccaaaggacggagagctggaggagctgcaggag
aagatcgaggagatccgcggtcagctgagggacgctctggctcgcagggcccaacttcag
actgctctcgccaaagagcgtgccgctgctgtgattccactgacccaggaagggccgccc
acagtcacagccacaatttgccgctccctcgtcaaagacttggaagggaaaaggtga
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