Clarias gariepinus (North African catfish): 128543084
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Entry
128543084 CDS
T10780
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128543084 (sox2)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128543084 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128543084
NCBI-ProteinID:
XP_053369374
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All DBs
Position
15:18699668..18701803
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AA seq
332 aa
AA seq
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MYNMMETELKPNPGGNNTGTGNTGGGTPGQKNSPERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YALPGGLLAPGGGGGGNLGGNGMSAGVGSGLGGLGVNLGVNQRMDAYAHMNGCWSNGGYG
MMQEQLGYAAAASPMQQQQQQHHVHRYDMSALQPYGSMTSAQTYMNGSPTYSMSSYPQLS
SMGSSVKSEASSSPPAVTSASHVRAATAPAPAHAPPPPSCQTGDLRDMISMYLPGAEVAE
QTGQSRLHLSQHYQSAPVHATTINGTIPLSHM
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagttgaaacccaatcccgggggtaataacaccggcacc
gggaacaccggaggcggcacaccgggacagaagaacagtccagagcgcgtaaagaggccc
atgaacgcgttcatggtgtggtcccgtggtcaacggcggaaaatggcacaagagaacccg
aaaatgcacaactcggagatcagtaagaggctgggggctgagtggaagctgctgtccgag
tctgagaagcgaccgtttatcgacgaggccaagaggctgcgcgctctgcacatgaaggaa
cacccggactacaagtaccgaccgcggcggaagaccaagacgctcatgaaaaaggacaag
tacgcgttgcccggcgggctcctagcaccgggcggtggcggcggtggaaatctgggcggt
aacggcatgagcgccggcgtgggttcgggcctcggcggcctcggcgtcaacctcggggtc
aatcagaggatggacgcgtacgcgcacatgaacggctgctggagcaacggaggctacggg
atgatgcaggaacagctgggctacgcggcggcggcgagtcccatgcagcaacagcagcag
cagcaccacgtccaccgctacgacatgagcgcgttgcagccgtatggctccatgacaagc
gcgcagacctacatgaacggctcgcccacctacagcatgtcgtcttacccgcagctcagc
tccatgggctcgtctgtgaaatccgaggccagctcgagtccacccgccgtcacgtccgcg
tctcacgttagagccgccacagcgcccgcacctgcacacgcaccgccgccgccctcgtgc
caaactggggacctgcgggacatgatcagcatgtatctgcccggggcggaagtggccgag
cagacgggccagagcagactgcacctgtcgcagcattaccagagcgcacctgtgcacgcc
accacgattaacggcaccatcccgttatcgcacatgtaa
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