Clarias gariepinus (North African catfish): 128543101
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Entry
128543101 CDS
T10780
Symbol
arap2
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1
KO
K18440
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128543101 (arap2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128543101 (arap2)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
128543101 (arap2)
Endosome - Golgi transport
Arf GTPase associated proteins
128543101 (arap2)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
128543101 (arap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
PH_11
SAM_1
PH_3
PH_6
SAM_2
Myosin_TH1
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
128543101
NCBI-ProteinID:
XP_053369446
LinkDB
All DBs
Position
1:27946160..28032366
Genome browser
AA seq
1647 aa
AA seq
DB search
MTCEDSDGIPSSFPLDPSEEISLWLSSLHLPQYAASFTQAGYRTLADCRGLTEEKLLQVA
RFPTGHRRRILHNLEFLMAGDNDNDEAPEIEEGMEKPVPFPRTIFLKERKRVTASQDKQT
NRVGESNRLPETQTLPTRTCKEKELKHDPGFISTVSYTLPRTNHKAFPSDTRSASLASSS
ESLSSSSHSLPADWENFLKVTTPAIVFDAKDEGCLIGFQGVMVDNDIYESGPFTASSARP
TRSYKLRHRPVPEIPERTIIPSHDLNVPVKSVTEQHSSADDASGSRQKGPLCGTQTSEDI
SPYGEVYLYNTIEENKLVVDTKEMFNQETKEKLEQKATRKQQAKQLDKVTESTSRPLSDD
YALLQPYISSQEQANEYSLSITKSLLQPSMSLPGTKSQVASGGVCSEPQDALSRLVKHTL
PLHNETSISPYACFYGHPKQSVKMGWLDKLSPQGNRVFQRRWVKFDGENLTYYNNEKEMY
SKGLVSLLAVKQVRSVGDNKFEVVTATRTFVFRVEKEGERQEWLAVLQTALKSRSSVSHT
PCKLSSSKSGYVELRGHKGRVYLSLTGTKIRLCKTDQDFNMGLAITLVDLMAACVKHVDR
RGFEINTPFRSFCFTAESEREREEWIEAVQESIVETLSNYEVAEKIWFNQSNRSCADCRA
SHPEWASINLGVVICKICAGQHRFLGSGISQVRSLKLDSSIWTNELVELFLEVGNENANK
FWAANLPPEEELEKRASPEQRAIFHHRKYKERKYRKLLEGMSSQEELNQALCSAVLQPDV
LLTMALVFSGADVMCATGDPEYSTPYLLAQKAGQRLQMEFLYHNQLSEFVKLEMVGARRS
SVDISTFMDGFLYCSVNMLKSTLNKKGRDDMVQCWCTLEGGYLSYYDGEKSATPIGRVDI
SDMASLAINPETMTGAGAVFTFEIYLESEKMLVFGAQTSDAQRAWVHAITKCLDADRVDC
LLKEDCDLIGRLYYKEGHDLYHWRRGWCTLVGSELFLHPENKHMNEMVLQLKRLQELTVS
THLERDEIIPVLLMVESGRTIYLHGVSKQDFTLWHSAIELAAGRDGRALSNQQLTKNDVP
IIIDSCIAFVTQYGLCYQGIYQKNGDPKRVAQLLEEFTKDARNVKLRVQDHQLADVTDTL
KCFLSSCEDALLAKELYPYWISALDEVSEKDRVEKYSTYIQSLPKINRSTLSALLQHLYR
IQSCSHINQMKARGLACVFSSCLFQTGGHAPQETFVVEDLINNYIQLFSVNKEQVKQMER
ENHCIMRWKDTTFSPAGDLIFEVYLEKKEPENCCLIKVSPTICADELTDSTLEMKGIQPS
QHDIWTTFEVIETGELERPLHYKEKILEQVLEWSTLEDPGSAFLLIKKFHGSKMSRSSSE
GQKNFTKGEQLKFKDGSCKLLSGNKFQDKYFVLRDKKLLLYKDAKSAKPEREVPVESVKC
YLGIRKKLKPINNWGFTVYTQKQQWYFCCEGKDSQLDWVTAIITSKNQGDVWPTHKEKSK
SLDQQSSREHAFARRASETEATKHSKEDKKMVPLNVTFDKLKLKNVNEADMHKMAMHKKN
FQKGNLMPGPTSATSGGNNALSRNKMAVEESPQAQCKSVPHPDSGNHTKFQQKKAMIGCN
TGQMPQSLIEELSTVLNQTGRMPRQES
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgaagactcagatggcatcccttcctccttccccctggatccgagtgaggag
atctctctctggctctccagccttcacttacctcagtatgccgctagctttactcaggca
ggctaccgcaccctggcagactgcagggggcttactgaggaaaagctcctacaagtggct
cgcttccccaccggccatcggcggaggatcctgcacaatctcgagttccttatggcggga
gataatgataatgacgaagctcctgagatagaagaagggatggaaaagcctgttcccttt
cctagaaccatctttcttaaggaaagaaaaagagtaacagcctctcaagataaacagact
aatagggttggggaaagcaacagattgcctgaaacccagactcttcccacaaggacttgt
aaagagaaagaacttaaacatgaccctggttttatttccactgtttcctacacactccca
cgtaccaatcacaaagcattcccttcagataccagatctgcctctttggccagcagcagt
gaatcactgtcatcatcttcacattctttgcctgcagattgggaaaacttcttgaaggtg
actactcctgccattgtctttgatgcaaaagatgaaggttgcctaataggattccaagga
gtgatggtggataatgatatatatgagagtggcccgttcacggcttcttctgcaaggccc
acgcgctcttacaagttacggcataggcctgtgccagagatcccagaacgcaccatcata
ccatcacatgacttgaatgtgcctgtgaaatctgtcacggagcagcacagcagcgcagac
gatgccagtggcagcagacagaaaggccccctttgtgggacccagacatctgaagacata
agtccctatggtgaggtttacctatacaacaccattgaagaaaacaaactggttgtggat
acaaaggaaatgttcaaccaagaaacaaaggaaaaactggaacagaaagcaacaaggaag
cagcaggccaagcagctagacaaggtgacagaaagcacaagtagacccctcagtgatgat
tacgctttgcttcagccatacatttctagtcaggagcaggccaatgagtattccttaagc
ataacaaagtccctcctccagccttccatgtcattgcctggaaccaaatcacaggtggct
tcaggtggcgtttgtagtgagccacaggatgctctctctcgacttgtgaaacacacgctt
cctctccacaatgaaacgtctatttctccttatgcctgcttctacggacaccctaaacaa
tcagtcaaaatggggtggctggacaagctctctcctcaaggaaatcgtgtctttcagaga
agatgggtcaagtttgatggagagaatcttacttactataacaatgaaaaggagatgtac
tctaaaggattggtctctctcctagctgttaagcaggtgcgctctgtgggagacaataag
tttgaggtggtcaccgcaacgagaacctttgtttttcgagtagaaaaagaaggagagcgg
caggaatggctggcggtgctgcagactgctctgaagtctcgctcatccgtttcccacacg
ccctgtaagcttagctccagcaagagcggctacgtggagctgcgcggccacaaaggcaga
gtctacctcagcctcacgggaactaaaatccgactctgcaaaacagaccaggacttcaac
atggggctggctatcaccttggtggatctaatggctgcttgtgtcaaacatgtggaccgc
agaggctttgagataaacacccctttcagatcgttctgcttcacagccgagtccgagcgg
gagagggaagaatggatcgaggcagtgcaggaatcgattgttgaaactctgtccaattat
gaagtggccgagaagatttggttcaaccagtcgaacaggagctgtgccgactgcagagct
tcgcatcccgagtgggcctctattaacctcggagtggtcatttgtaaaatttgtgcaggt
cagcatcggttcctgggctctggtatttcccaagtgaggagtctgaagctggacagcagc
atttggaccaatgaactggtggagctttttttggaagttggaaatgagaacgccaacaaa
ttctgggctgccaatctacccccggaggaggagttagagaagagggcatcgccagaacag
cgcgcaatttttcaccacaggaagtacaaagagaggaagtacaggaaacttctggaagga
atgagcagccaggaggaactcaaccaggctttgtgttctgcagtcctccaacctgatgta
ttgttgaccatggcgttggtgttcagcggggcagatgtaatgtgtgctacaggggatcct
gaatactccactccttacctgctggctcagaaagcaggccagaggctgcagatggagttt
ctctatcacaatcaactctcagagtttgtaaagttggagatggtaggtgccagaagatcc
tcagtagacatttctaccttcatggatgggtttctttactgttcggtcaacatgctgaag
agcaccctgaataaaaaagggagagatgacatggtccaatgttggtgcacactagaaggt
ggctacttgagttactacgatggtgaaaagagcgccacgccgataggaagagtggacatc
agtgacatggcaagcctggccattaacccagagaccatgactggagcaggggcagtgttc
acctttgagatctacctggagtctgagaaaatgcttgtgtttggcgcacagacatcagat
gcacaaagagcctgggtccatgccatcaccaagtgtttggatgcggatagggtggactgt
ttgttgaaggaggactgtgatctgattggtcgtttgtactataaggagggtcatgacctt
tatcactggagacgaggatggtgcactttggtcggctctgagctgttccttcatcctgaa
aataagcacatgaacgagatggttctacaactcaaacgcctgcaggaacttactgtctcc
actcatttggaaagagatgagattattccggttctgctcatggttgagagtggcaggaca
atctaccttcatggcgttagtaaacaagactttacattatggcactcggcgatcgagtta
gctgccggcagagatggcagagcactaagcaatcaacagctgactaaaaatgacgtcccc
atcatcatcgacagctgtattgcctttgttactcaatacggtttgtgttatcagggcatc
tatcagaaaaacggtgacccaaaacgtgtggcccagctcctagaggagttcactaaagat
gcgcggaatgttaagcttagagttcaggatcatcaattagcggatgtaacggacacactc
aaatgcttcctgtccagctgtgaggatgctttattagctaaagagctctacccttactgg
atttctgctctcgatgaagtaagtgagaaggaccgggttgagaagtactccacttatatt
cagagtttacccaagatcaacagatcaactctttcggcgctattacagcatctgtacagg
attcagagctgctctcatataaatcagatgaaggctcggggtctggcatgtgttttctca
tcctgtctcttccaaacgggaggacatgcacctcaggagacttttgttgtggaagatctc
atcaacaactacattcagctcttctctgtgaacaaggagcaagtcaagcaaatggagaga
gagaaccattgtatcatgagatggaaggacactacattctctccagcaggtgacctgatc
tttgaggtgtacttggaaaagaaagagccagaaaattgctgcttaatcaaggtctctccc
accatatgcgctgatgagctgactgacagcactctggagatgaagggcatacagccaagc
cagcatgacatctggaccacatttgaggtcatcgagactggagaacttgaacgcccatta
cactacaaagagaagattctcgagcaggttttagaatggagcacgctagaggatcctggc
tcagctttcctgctcatcaaaaaatttcatggatctaagatgtcccgttccagctcagaa
gggcagaaaaacttcactaaaggcgagcagctcaagtttaaagatggctcctgcaaattg
ctttctggaaacaagtttcaggacaaatactttgtactgcgggataagaagctgctgcta
tataaagatgcaaaaagtgcaaaaccagagagagaggttcctgtggagtcggtgaaatgc
tatttagggataagaaaaaagctgaaaccaataaacaattggggtttcacagtttacacg
caaaagcagcaatggtatttctgctgtgagggaaaagattcacagctggactgggttaca
gctattatcacgagtaagaatcaaggagacgtatggcctacacacaaagaaaagagcaag
tctttagatcaacaaagcagcagagagcatgcttttgctcgccgggcttcagagactgaa
gcaaccaaacacagcaaggaggataagaagatggtgcccctaaatgtaacttttgacaag
ttgaagttaaagaacgtaaatgaggctgatatgcataaaatggcaatgcataagaaaaat
ttccaaaaaggaaatttaatgccaggaccaacttcggccacgagcggaggaaataatgca
ctgtccaggaacaaaatggctgtggaagaatccccacaggctcagtgtaaatctgtacct
catccagattctggtaaccacacgaaatttcaacaaaaaaaagcaatgattggatgcaac
acgggacaaatgcctcagagtctaatcgaagaactgagcaccgttcttaatcaaacagga
cgcatgcctagacaagaaagctga
DBGET
integrated database retrieval system
