Clarias gariepinus (North African catfish): 128543112
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Entry
128543112 CDS
T10780
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03410
Base excision repair
cgar03420
Nucleotide excision repair
cgar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128543112 (rfc4)
03410 Base excision repair
128543112 (rfc4)
03420 Nucleotide excision repair
128543112 (rfc4)
03430 Mismatch repair
128543112 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128543112 (rfc4)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128543112 (rfc4)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128543112 (rfc4)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128543112 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
128543112 (rfc4)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128543112 (rfc4)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128543112 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
128543112 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_30
AAA_22
AAA_11
AAA_24
DUF815
SLFN-g3_helicase
Mg_chelatase
AAA_14
Cdc6_lid
Gp44_lid
AAA_5
AAA_19
AAA_28
RuvB_N
DNAX_ATPase_lid
ResIII
Kinesin
AAA_7
UPF0176_N
14-3-3
TIP49_C
Motif
Other DBs
NCBI-GeneID:
128543112
NCBI-ProteinID:
XP_053369421
LinkDB
All DBs
Position
15:27282842..27289942
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGSTQSVKAQKEKVTASSSGDHKRQKPVPWVEKYRPKCVDDVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKS
FAQLTVAGTRTDGKSCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLGDEIQQERLVEICQKENLKYSKEGIDALVKVSEGDLRKAITLL
QSAARLSAEKDITESVVIEIAGVVPPKVIENLLQTCHKGNFEKLEVAVKNMIDEGYAATQ
ILSQLHDVIIKEKLGDKQKSVITENMAVVDKCLADGADEYLQLLNLSSVIMQQATQST
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaagggatctacacagagtgttaaagcacagaaggaaaaagttaca
gcttcgagcagtggagatcataagcgacagaaaccagtgccctgggtggagaagtacaga
ccaaagtgcgtagatgacgtcgctttccaagaggaggttgttgcagttttgaagaaatca
ctagagggcgctgatctgccaaatcttctgttttatggcccacctggaacaggaaagacc
tccactattcttgctgcagccagagagctttatgggccagagctttacagacagcgagtg
ctcgagctgaacgcctcggacgagagagggattcaggtgatccgtgagaaagtgaaaagc
tttgctcagctcacagtggcagggacacggacagatggaaaatcctgtcctccgtttaaa
atcatcattctggacgaggcggattccatgaccaatgcggctcaggccgctctcagacgc
actatggagaaggagtcgcgcacaacccgcttctgcctcatctgtaactacgtcagcaga
atcatcgagcctttgacgtcccgttgctctaaattccgctttaaacccctcggcgacgag
attcagcaggaacgtctggtggaaatctgccagaaggagaatctcaaatacagcaaagag
gggattgacgcgctggtcaaagtgtctgagggagacctccggaaggctataacgctccta
cagagcgctgccaggctgagtgcagagaaagacatcacagagagcgtcgtcatagagatc
gcaggggtggttcctcccaaagtgattgaaaatctgcttcaaacctgccacaaaggcaac
tttgaaaaattagaggttgctgtgaagaacatgatagatgaaggctatgctgctacacag
attctcagccagctccatgacgttattatcaaggagaaactgggtgacaaacagaaatct
gtcatcactgaaaatatggctgttgttgataagtgtttggcggacggagctgacgaatac
ctgcagctgctcaacctgtcctccgtgatcatgcaacaggccacgcagagcacctga
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