Clarias gariepinus (North African catfish): 128543147
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Entry
128543147 CDS
T10780
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
128543147 (hps3)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128543147
NCBI-ProteinID:
XP_053369467
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Position
15:12630017..12644510
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AA seq
1008 aa
AA seq
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MVHVYNCHPFACQRIVPAEQEPGLVCCGGGALFVVSAGGCRIEAYHMQQQECPLICRFST
MGIVHSIVYSQIGDYLVTIEEKNGATYLRAYTNWRYQAAEKMRVGVRLLGHLMRGSVLHG
NPKEQMEIVEIPLSETPLCTACCPITGALLVACPKSLVLFGLTRQSLSDQLNALDFERLL
ILYVSGWSPLQVGLCCGYVALQTELEVLVVKLENLEKRCASSEEHAQPSVNDFVATGVTD
IVDDKKEQQSPIESDDFFVFPKHLELLGDMAKDCGVSLSLEWTGMETVASNMGVTYILYR
RFAPDFFQGCSVEETRLHSLQLHPMHTGNPDDAVSSDAEKRDPACVFCFFSLPNAGYMYS
LKNTVELVSTYQYPEKAHQALLCNQFLHVITRNALQCFTVRCSAVAARVEDPYIDTTMKA
CPPFTMEVCALRIQLFIGLKSLCHDGNHIVLLTAADVETKAETERAAKKTMSRKTSVSKI
KESSESGHGWNLYVISTVSTLQLYREMVEYSKRYEQTNQLSRDCVHLLSEAHLLLRASLL
SPTTDRAEIQQAFQESCAQLGDCFSRLDRRDCHLALPYYKMSGLSVTEVIRRNAATWRGP
VPDYGKGFLFFLKHSLYEENMEELSEETANTVLEIFSKAEPGQLPYIVSSSFMGNASPAS
VLAHLEQLELSGAPSVTVTLCKASQALRLGDLLLYQQQMDRHAEMLQVYGFIEEPKLLMQ
RRERAVVPTHLARHLRDTQDGLLVAAIVALHENSKVKLREAELFFQELCKDSTEPQSIPR
LLVDFWEALLVASSQESVIQELLFHLISVYVEHIMCGERPGIKALKTAEDLINSCSHYGP
LFPWLSFLTPAQYPITHDHQEDLQKLQSLLCGPTLDVSSIVPLLEQLPDTDNTGLSVHLL
CTTRLGQHENAIEKLLDRCPQAIISYANHEFHSDKMILWWQKLVPELCKRTRLSSEDNGV
LISALKETLTLVAMELHPVEFLDLLPDDGTAHFFLPHLLNCTQKHLLT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtgtataactgccacccgttcgcgtgtcagcggatcgtgccggcggagcag
gagcccgggctggtgtgctgcggcgggggcgcgctgttcgtcgtctccgcgggaggatgt
aggattgaggcgtatcacatgcagcagcaggaatgtcctctaatctgccgcttttccacc
atgggaatagtgcacagcatcgtgtacagtcagattggagattacctggtcactattgag
gagaagaatggtgccacctatctgagggcatacaccaactggcgctaccaagcagctgag
aagatgcgtgtaggtgttcgtttgctcgggcacctcatgcgtggctcggtcctccatggt
aaccccaaggaacaaatggagattgtagagataccattgtcggagacaccgctctgcact
gcctgctgccccataacaggtgccctgctggtggcctgtcccaagagcctggtgctgttt
ggtctgacgaggcagtcgcttagcgatcaacttaatgctcttgactttgaaaggctcctc
atcctgtatgtttctggttggagcccattgcaggtgggtctctgttgcggatacgtggcc
ttgcaaacggagctggaggtgctggtggtgaagctggaaaacctggaaaagagatgtgca
tccagtgaagagcatgcccagccctctgttaatgattttgttgcaactggagttactgac
atcgtagatgataaaaaggaacaacagagtcccattgagtcagacgacttctttgtcttc
ccaaaacatctggagttgctgggagatatggcaaaagattgtggagtgtctttgtcttta
gaatggactgggatggagacagtggcaagcaacatgggagttacctacatcttgtacagg
aggttcgccccagatttcttccagggttgcagtgtagaggagacacgcttacactccctg
cagcttcaccccatgcacactggtaatccagatgatgcggtaagcagcgacgctgaaaag
cgcgatcctgcctgtgtgttctgtttcttttctctgccaaatgctggttacatgtacagc
ctgaagaacactgtagagctcgtctccacctatcaatatccagaaaaggcccatcaggct
ttgctgtgcaaccagtttctacatgtcatcacacgaaatgctctgcagtgtttcaccgtg
agatgcagtgctgtggctgcccgagtcgaggacccctacattgacaccaccatgaaggct
tgtcctcccttcactatggaggtttgcgccctccgtattcagctgttcatcggtctgaag
tctctgtgtcatgacgggaatcacatcgtgctgctcacagctgctgacgtcgagaccaaa
gcggagaccgagcgagcggctaaaaaaactatgtccaggaagacctcagtgtcaaagatt
aaggagtccagcgagagtggccatggctggaacctgtatgtgataagcacagtgtccaca
ctgcagctctacagagagatggtggagtacagtaaacggtatgagcagaccaaccagctg
tcccgggactgtgttcatctgctaagtgaggctcacctgctgctcagagccagtctactc
agtccgaccacagacagagccgagatccagcaggcctttcaggagagctgtgcccagctg
ggagactgcttcagcaggctggataggagggattgtcacttggctcttccatactacaag
atgtctggcctgtcagtgacagaagtaattcggaggaacgcggccacatggagaggtccc
gtcccagattatggcaaagggttcctcttcttccttaagcactctctgtatgaggaaaac
atggaagagctcagcgaagaaactgctaacactgtgttggagatcttcagtaaggctgag
ccaggccagctcccatatatagtgagcagctcattcatggggaatgcaagtcctgccagt
gtccttgcacacctggaacagctggagctcagtggagctccatctgtcacagtcacgctg
tgtaaggcttctcaggcactgcgcttaggagacctgctcctctaccaacagcagatggat
cggcatgctgagatgctgcaggtgtatggctttatagaggagccgaaacttctcatgcaa
cgcagagagagagccgtggtacccactcacctggcacggcacctgagggacacacaggac
ggcttgttggtggctgccattgttgcacttcatgaaaatagcaaggttaaactgcgggag
gctgaactcttctttcaggagttgtgtaaggacagcacagagcctcagagcattcctcgg
ttgctggtagatttttgggaggctctgctggtagcatcgtctcaggaatcggtcatccag
gagcttttgttccacctcatctctgtatacgtcgagcacatcatgtgcggagagcgcccg
ggcattaaagcgcttaaaacagctgaggacttgatcaactcttgctctcactatgggcca
ctgttcccgtggttaagctttttaactccagctcaataccccatcacacatgaccaccaa
gaagacctgcagaaactccagtctctgctgtgcggtccaacgctggacgtgtcctcaatt
gtacctctgctagaacagctacctgatactgacaacactggcttaagcgtgcacttgctc
tgcaccaccagactgggtcagcatgagaacgctatagagaagctactggaccgctgccct
caagccatcatctcctacgccaaccacgagttccatagtgacaaaatgattttgtggtgg
caaaaactggttcctgagctttgtaagaggacaagactttcttcagaagataacggtgtt
cttatcagcgctcttaaagagactctgacattggtggccatggagctgcacccagtagag
tttttggacttgttaccggacgatggtactgcacacttcttcctgcctcatcttctcaat
tgcacccaaaaacatctccttacataa
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