Clarias gariepinus (North African catfish): 128543151
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Entry
128543151 CDS
T10780
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128543151
03037 Cilium and associated proteins [BR:
cgar03037
]
128543151
Transporters [BR:
cgar02000
]
Other transporters
Pores ion channels [TC:
1
]
128543151
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128543151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
128543151
NCBI-ProteinID:
XP_053369473
LinkDB
All DBs
Position
15:20802425..20828163
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AA seq
1132 aa
AA seq
DB search
MSVVRQTSSLTQPLTSSKRHKSVRKSSRKIYTPYQDNPVSSDDEDKDAERMDSNDPEEMF
QNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQAAGADLLKKISR
VLYNILVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAG
APFGTTRSKTIPRDQIASAQDLDTIWSLGGYLQYSVLFYGYYGNVRKIGSAGYRLPLAYF
LVGMAVFAYSFITLLRKMAKNSRLSLSSASSENYTFCWRIFCAWDYLIGNPEAAESKGAA
IVNNIREAIVEEQEKKKETSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQQK
AELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLI
IALLDKVNSMSSEIPGNWSDSTSYLATISQPAETNLSTVVPEITEGRNSTFTMAVTDVNQ
TTITVKHSIVSGPSAPVLPAINQSIIYEYNGKSQQDQCWETYVGQEMLKLSIIDMIFTVA
SILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCL
PAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVR
YRPSQHCGPFSGQEKIYDIISETIEKDFPAWFSKVMGYITSPVVVLPALLLLFMLIYYLQ
SIARSLKFTNNQLRMQLQTERTDDKKKVFQLAAARLQPTEGGEQKPEQESDITSMESPAR
SASPPRRNGSVNKILSPARCSNSIRTIAQSASRLDDRSPSILVRPKPSSAYRVIANPSVP
QREIHRVEYIPIRHQVYSGRSKSYHHMAYNPSVRFSESVHSDPVFRKGIRPMHPEPGIVT
AQNYLGRRAHTTRYVILNEHEPRKKVMRSTMRLPRHYRVVDEAAEIVELYPRNVKCYIPR
GQQPHLSEEEEEEEANESGKRGSLGHSHRPKSLSDLHQRSPARFYIGETLDSRLARRVYG
AEEEEDYLDWEEEGPRSRSRTNIKITETPHRHGEPHVKSKNKRKGEPSLTESDSASLESS
SDQQNSSTDQYIQVIHNKEKYLKHSTKMTKKKSKTSAELKTTGPKDLVCSNV
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtaagacaaacatcatcactgacccaaccactgacatcctccaaacggcac
aagagtgtgagaaaaagctccaggaagatctacacaccttaccaggacaatccagtgtcc
tctgatgatgaagacaaggatgcagagcgcatggacagtaatgatcctgaggaaatgttc
cagaatattcagtaccagaaggaaatcattgccaacatccgaacaagaccctggccaatg
agacgcaagctcaaagtcttaaagcaggccagagagatcgtgctgaagtatgaaggtagg
ctgaccaggacgcggggataccaggctgcaggtgcagatttgttaaagaagatttcaaga
gtcctctacaacatccttgttttatttatcccatgggaaatgaggattaaaaagattgaa
agtcactttggatctggtgtggcctcatattttattttcctcagatggttatttgggatt
aacatcgtcctcacaattatgactggagcctttattgttcttcctgagctcctcgctggc
gctccttttggcaccacacgcagcaaaaccatcccaagggaccaaatcgcatcagctcag
gaccttgacaccatctggtcacttgggggttacctgcagtattctgtgcttttctatgga
tattatggaaacgtgcgtaagattggcagtgctggttatcgtctgcccctggcctacttt
cttgttgggatggctgtttttgcctacagtttcatcactctcttaagaaaaatggcaaag
aactcacgattgagtctatccagtgcttccagtgagaactacacattctgctggcgaatc
ttctgtgcctgggactacttgattggcaatcctgaggctgctgaaagcaaaggagcagca
atagtcaataacatcagggaggctatcgtagaagagcaagagaagaaaaaagaaaccagc
ctagcggttttgatcagcttgcggattctggccaacatcctggtcctgctctcactggca
ggaagcatctacatcatctactttgttgttgatcgctcacaaaagctggagcagcagaaa
gcagagcttactctgtgggaaaagaatgaggtgagtgtagtggtgtccctcattactatg
attgctccatctgcctttgagctggtggcccagttggagatgtatcacccaagaacaagc
cttcgattccaacttgccagggtgctggtgttgtatcttggaaacctctatagtctgata
attgccctgttggacaaagtaaacagcatgagctctgagattccaggtaactggtctgac
tccacatcttacctggccaccatttcccagcctgcagaaaccaacctgtctactgttgtc
ccagagatcactgagggaaggaatagcactttcaccatggctgtaacagatgtaaaccaa
acgaccatcactgttaagcacagcattgtgtctggaccatcagcaccagtcctacctgca
attaaccagtccattatatatgaatacaatggcaaatcccagcaggatcagtgctgggag
acctatgttgggcaggaaatgttaaagctctcaatcattgacatgatcttcaccgtggct
agcattttgttgatcgattttatccggggcctggtggttcgatacctgagtgactgttgc
tgctgggatctggagagcaaatttcctgaatatggtgaattcaagatagctgaaaatgtc
cttcatctcatatacaaccagggaatgatatggatgggggccttcttctctccctgcctt
cctgccttcaatgtgttgaagttaatcgggctcatgtatctgagaagctgggctgtgctc
acctgcaacgttccacatcagcaggtcttccgggcttccagatctaataatttctacctg
gccatgcttctcttcatgctcttcctctgtatgctaccaaccatcttcgcgattgtgagg
tacaggccatcacagcactgtggccctttcagtggtcaagagaagatctatgacatcata
tctgaaacaatagaaaaggacttccctgcatggtttagtaaggtgatgggttatatcaca
agtcctgtggtggtcctgccagccctgttgctcctcttcatgctgatctactacctgcag
tccatcgccaggtctcttaaattcaccaacaaccagttgcggatgcaacttcagaccgaa
cgcacagatgacaagaaaaaagtttttcagttggctgcagcacgtttacagccaactgag
ggtggtgagcaaaaacctgagcaggagagtgacatcaccagcatggagtccccagcccgg
tctgcttctcctccacgtcgcaatggcagtgtcaacaaaattctttcgccagcccgttgc
agcaacagcatccgcacgattgcccagtcagcctcccggcttgatgacaggagtccctcc
atccttgtgagacccaaacctagcagtgcttacagagtaatcgccaacccctccgttccc
cagagagagattcacagggtggaatacatccctatcaggcatcaagtctattcaggccgt
tccaaatcataccatcacatggcctacaatccatctgtgcgtttctctgagagtgtccac
tcagacccggtgttcaggaaaggcatcaggcccatgcacccagagcctggtattgttact
gcacaaaactacctgggtcggcgtgctcacaccaccagatatgtcatcctaaatgaacat
gaaccacgcaaaaaggttatgcgttctaccatgcgtctgcccaggcactaccgggtggtg
gatgaggcagctgagattgtagagctttacccccgcaatgtgaagtgctacattccacga
ggtcagcagccccaccttagtgaggaagaggaagaagaggaagctaatgaaagtggaaag
agaggatctttagggcactcacaccggccaaagtcactctcagatctccatcagagatca
ccggcacgcttttacattggtgaaactctggacagtcgcctagcacgtagagtgtatgga
gcggaagaagaagaagattatctggactgggaagaggaaggccctcgtagccgatcccga
acaaatattaagatcacggaaacaccacacagacatggagaacctcatgtcaagtccaag
aacaaacgcaaaggagagccatcactgactgagtctgattcggcgtcattggagtccagc
agtgaccagcaaaacagcagcactgaccagtacatccaggtcatccataacaaagagaaa
tacctaaaacacagcactaagatgactaaaaagaagtccaaaaccagtgctgaactaaag
acaaccggaccaaaagatctagtgtgctcaaatgtttga
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integrated database retrieval system
