Clarias gariepinus (North African catfish): 128543213
Help
Entry
128543213 CDS
T10780
Symbol
ptgfr
Name
(RefSeq) prostaglandin F2-alpha receptor
KO
K04262
prostaglandin F receptor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128543213 (ptgfr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128543213 (ptgfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128543213 (ptgfr)
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Lipid
Prostaglandin
128543213 (ptgfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
128543213
NCBI-ProteinID:
XP_053369554
LinkDB
All DBs
Position
15:8479005..8480264
Genome browser
AA seq
370 aa
AA seq
DB search
MSYNGTAKTECLKPSTMSNESCHIKNISVTSSVITMTVGIVSNTLALFILLNAYRRLRMK
SKASFLLFASGLVLTDFLGHLINGSLALYVYALNKEWERFDPKQILCGFFGVCMSFFGLS
PLLLGGIMAVERCIGVTRPLFHTTALTSYHANRLLALSWILALFVALLPVLVCRPYQVQG
SRSWCFYRLMGVRDWLDTLLPMIFSVLGLLALLVSFVCNTVTGLTLLWNRIHREHNYHCS
RRSSLHSEMICQLLAIMMVSCVCWGPFLVTIIITSLQEKGEDAYLLLTVRLATWNQILDP
WVYILLRKAVLKRLCLLAKRFHSPRTKHGPQISWRFSALGSSVEASSSVSSRPDIICLDG
SYLPDNLNYM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaatgggactgccaaaacagaatgtttgaaaccaagcactatgtctaatgag
agctgtcacataaaaaacatctctgtcacctcctctgtaataaccatgacggtggggatc
gtctccaataccctggctctcttcattcttctcaatgcctaccggagactccgcatgaag
tccaaagcttctttcttgctctttgcaagtgggctggtgttgactgacttcctgggacat
cttataaatggctctctggctctttatgtgtatgccttgaacaaagagtgggaaagattc
gaccccaagcagattctttgtgggttttttggtgtttgtatgtctttttttggtctgagt
cccctgctgcttggaggtatcatggctgtggagcgctgcattggagtgactcggccactc
tttcacaccacagctctgacctcctatcacgcaaaccggctcctggctcttagctggatc
ctggccctgttcgtggctctgctgccagtgttagtgtgccgcccataccaggtacagggt
tcccgaagctggtgtttctatcggttaatgggggtgcgtgactggttggatacgctcctc
cccatgatcttttctgtactgggattgctggctctgctggtctcattcgtgtgtaacact
gtgactggattaactctactgtggaacagaatacatcgtgagcacaactaccattgctct
cgcagaagttctctccattctgaaatgatttgccagctccttgctataatgatggtatcg
tgtgtttgttggggtccttttctggttacaatcataatcacaagcttgcaagagaaaggt
gaagacgcatacctgttgttgactgtacgactggccacatggaaccagattcttgacccg
tgggtgtacatacttctgcgcaaggctgttttgaagcgtctttgcctgctggcaaagaga
ttccacagtccacgtacaaaacatggaccacaaattagttggaggtttagtgctctgggg
agctctgtggaggcaagcagctctgttagcagcagaccagacatcatttgcttggacggc
tcgtacctgccagacaatcttaattacatgtaa
DBGET
integrated database retrieval system
