Clarias gariepinus (North African catfish): 128543387
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Entry
128543387 CDS
T10780
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03018
RNA degradation
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128543387 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
128543387 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128543387 (lsm7)
03041 Spliceosome [BR:
cgar03041
]
128543387 (lsm7)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128543387 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
128543387 (lsm7)
Spliceosome [BR:
cgar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128543387 (lsm7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
128543387
NCBI-ProteinID:
XP_053369764
LinkDB
All DBs
Position
15
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTAVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagagaagaagaagaaggagagtatatttgatttgtcaaagtacatcgac
aaaaccatccgagtaaaattccaaggtggacgtgaagcaagcggcgtcctgaaagggttt
gatcccctgctgaacctggtgttagacggtacaattgagtacatgcgtgaccctgatgat
cagtataaactgactgaggacaccaggcagcttggcctggttgtgtgtcgaggaactgct
gttgtcctcatctgtcctcaagacggcatggaggccattcccaacccctttatacagcag
caggacggctaa
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integrated database retrieval system
