Clarias gariepinus (North African catfish): 128543388
Help
Entry
128543388 CDS
T10780
Symbol
atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128543388 (atxn1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AXH
Motif
Other DBs
NCBI-GeneID:
128543388
NCBI-ProteinID:
XP_053369765
LinkDB
All DBs
Position
15:complement(29859581..29871476)
Genome browser
AA seq
721 aa
AA seq
DB search
MKPAHERNQECLPPKKRDLNNASTIPNNNNNSSSSSSTGGGGGGGGGGDEATMSQSSGSG
GEAQGGSGGGEWVRTQPNLHYGVDGPESIAPGLPVDQFGMVYKVAVPSVTYSPTSLHPVL
GHISPAYTVPSSLLQHTGIHYPPLGYAPIPQFVSPQYAAAVPYAVPPGFVHSPLIQAQSH
LVPYPPVIQEGVVSSPPQQQVAAHTYAKVGAAGGVPLVLTSEQVAAAATAAASSSSAQQQ
HSLSAIGMIPTAERVPVFYHTSAATERAAQNQEHAREVNGGERENGRDSIQDVVYVPRNA
AARMQQGRASPGQRTTPDIDLEVQQVVGRLASPVRVRREVAHGSSQGGREGQGESRTPYT
LHPGGQPDPQTAQPGGHTVILQNGQPVLMPLDYHHHHHHHPPPHPNNDAAAETAKHKISE
ESGVAERVLAVELPSAPAAAAPPPSHFTKGAIIQLATGELKRVEDLKTNDFVRSAEASTG
LKIDSSMVVDIRASSQRPGLVALRFAVGERQSKVSIDVPPEHPFFVFGQGWSSCSPERTG
QLYGLSCHHLQVGDVCVSITLQQHSAPHQMPPSVPQQPQQPTHSRTSTKANSMSGASSGQ
PMGPPAPHTPRPQGQLRMERAHRERADREEPLKPSASGHGDAPSRPERTSAEHTRSQSSY
YLHTEAHGPSQRRWSTPGFQRYPIKREEGGLAAPPPPGSSRPSFIPQEVKLSIEGRSNAG
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggctcacgagcgcaaccaggagtgcctccctccaaagaagcgcgaccttaac
aatgcttccaccattcctaataataataataacagcagcagtagtagtagtactggagga
ggtggaggaggaggtggagggggagacgaagcgacaatgtctcagagctctgggtcgggc
ggagaagctcagggtggaagcggaggtggcgaatgggtccggactcaacctaacctgcat
tacggagtggatgggcccgagagcatcgccccggggttacctgtggatcagttcggcatg
gtgtataaagtcgccgttccgtcggtcacctactcgcccaccagcctccaccccgtgctc
gggcatatctctccagcctacacggttccctcgtcgctcctccagcacaccggcatccat
taccctcctctcggctatgcccccatcccgcagttcgtcagccctcagtacgccgccgcc
gttccctatgcagtccccccgggcttcgtccacagccccttgatccaggctcagtcccac
ctggtgccctatccgcccgtcatccaggaaggtgtggtctcgtccccgcctcagcaacaa
gtcgcggctcacacctacgccaaagtgggagccgcaggaggcgtcccgttggtgctgacg
tccgaacaggttgcggcggcagcgacagccgccgcgtcttcttcgtctgcgcaacagcag
cacagtctaagcgcgatcgggatgatccccacggcagagcgcgtccccgtgttttatcac
acgtcagcggccactgaacgtgccgcgcagaatcaggagcacgctcgagaggtgaacggt
ggggaacgggaaaacggcagggacagcattcaggacgtggtttacgtgccgaggaacgca
gcagcgcggatgcagcaaggaagagcatctccgggtcagcgcaccaccccggatatcgac
ctcgaggtccagcaagtggtggggcgtctggcgtctccggtccgcgttcgcagagaagta
gcgcacggctcgtctcagggtggcagagagggtcagggggagagcaggacgccgtacacg
ttgcacccaggcggtcaaccggaccctcagacagcgcagcccggtggtcatacagtgatc
ctgcagaacgggcagccggttctcatgccactggactaccatcatcatcatcatcatcat
cctcctcctcatcctaataacgacgctgcagccgaaacggcaaaacacaaaatctcagaa
gagtcgggtgtagctgagcgggtgctggcggtggagctgccctccgccccggccgcggct
gcgcccccaccctcacacttcaccaagggcgccatcatccagttagcaacgggcgagctg
aagcgcgtggaggacctgaagacgaacgacttcgtacgcagcgccgaagcgagcacgggg
ctaaagatcgactcgagcatggtggtggatatacgcgctagctcgcagagacctggctta
gtcgcactacgctttgctgtcggcgagcgccagagcaaagtgagcatcgacgttccaccc
gagcatccgttcttcgtcttcggtcagggctggtcatcctgcagcccggaacgcaccggc
cagctctacggcctctcctgccaccacctccaggtgggggatgtctgcgtgtccatcacc
ctccagcagcactccgcgcctcaccaaatgccgccgtcggttccccagcagccgcagcag
ccgacccacagcaggacttccaccaaagccaactcgatgtcaggagcctcctccggccag
cccatgggccccccagcgcctcacaccccgcggcctcaggggcagctcaggatggagcgc
gctcacagagagcgagccgacagggaggagcccttgaagccgagcgcctcgggacacggg
gacgcgccctccagacccgaaaggacttccgcggagcacacgcgcagccagagcagttat
tatttgcacaccgaggcccacgggccctcacagaggcgttggtccacccccggtttccaa
agataccccatcaagagggaggagggaggcctggccgcgccgccgccgccgggctcctct
cggccctcttttatccctcaggaggtcaaactatccatcgaggggcgctccaacgccggg
aagtag
DBGET
integrated database retrieval system
