Clarias gariepinus (North African catfish): 128543395
Help
Entry
128543395 CDS
T10780
Symbol
myom2a
Name
(RefSeq) myomesin-2 isoform X1
KO
K24495
myomesin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128543395 (myom2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128543395 (myom2a)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128543395 (myom2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
Tissue_fac
Receptor_2B4
C2-set_2
C2-set_3
C1-set
Motif
Other DBs
NCBI-GeneID:
128543395
NCBI-ProteinID:
XP_053369775
LinkDB
All DBs
Position
15:7980185..8004487
Genome browser
AA seq
1506 aa
AA seq
DB search
MPTRAMPIYQKTQTKVGHQYSSSKHVVQQISSRISSSKSTKKEQVQATEVMAEPAYTVPA
FRERAPEGMEEYQRVSSHLERNLTSLQEELHSIRTATHEQVVNIEITNEVRALKYVRTEL
PYEIPKVPDFLLGLRSHTVWEKTPVKLFCTVAGTPTPIVQWYKNGVPVDPLSTPGKYKIE
NKYGVHSLIISRCTVADSAVYSAVATNSQGKVTSKATVCVRRPSGAAESSYLPGHAPLPS
DIQRSKLEVTLLDRFGVTFGTEGESLTLVANMVVVPDLPNLPPEVMWYRDETLLTTSRWA
EMHVGGGAARLTLPHLNKDDEGLYTLRIWTKQGTTEHSAYLFVKDAAPAVAGAPGAPMDV
TASDANKDYVLVSWKPPNLTNEAPITGYFVDRRKSGTKDWVQCNGTPVKVCKLPVHGLTE
GDSYHFRVRAVNSAGISLPSRMSSGVIAADVESDVEVIKIEGKYDIAIRQEDLQGEYVTL
PEPPTDVHASEINQTYIVLSWKPPTPRGRATVWYLMEKSVGDSNLWQRVDTGIQIRSPRY
PLYDLEDKKAYRFRVITVNKYGPSEPSEPTALIQKADPYGSIPNIGVPSAPGKVMASRNT
KTSAFVQWESPKQGKNLMGYYVDCCVVGSKTWIPCNHRPYKHTRFVVHGLTSGDTYKFRV
QAVNAYGLSEESQESDPLFIDAAIAVPSAPYGITLLSCDGASMTLAWKRPKRTGGSRITS
YYLDKREADSVLWKEVGSRPATGRVYKVENLTAGTFYEFKVQAGNMAGVGMPSEPSVPFA
CEAWTMPEPGPAYDISFWEVRDDSLLVQWKSPVYTGDTPIKGYFLEMAKKGSFDFVAVNA
EVVNHSYLKVTGLENGASYVFKVCAVNSAGRGKESDVSEAVCIKALPGTKEIVCGVDEET
GDIFLSFEACELSEDSKFIWSKSYKEISESKRVTASAVGRTSRLTFANLEKEDLGLYSVA
VTDTDGVSSSYTLKEEELKKLLELSYHIRHPLVPLKTELNYEVLEKGHVRFWLQAKKLSS
AASYRFIVNDKEVTSAEGHKISHDASTGIISMVVEHFTRSNEGTYTLQIHDGKAKNQSSL
VLVGDVFKAALKEAEFQRKEHLRKQGPHFSEYLSFHVDEECTVKLVCKLANVRKDTTFKW
FKEDEEITLDVAPNPMSGSCTLPIPLFSRKDQGTYKAVLSDDRGKDISAYEISGQIFEDI
INAIARISGSSASELMLQCTPEGIRLQCYMKYYTEEMKTSWFHKESKIASSEKMRIGGTS
EMAWMQICEPTDREKGHYTIEIHDGKSAHTRSFDLSGQAYIDAYAEFQRLKAAAFAEKNR
GRVMGGLPDVVTIMEHKTLSLTCTVWGDPKPEVTWFKNEQEVISDDHNQISFESGKFASL
TIKTVTVDDSGKYSINVRNKYGGEFVEITVSVYKLGEDIPEPKLGQMAKPTSAPKSVAPP
SSKPQTPAPSVKSPTPSPAQSFKSPTPTPSQSAKSPPPASKSPTPPRSAKSPTPPRFMRS
PTPTKK
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgagggccatgccgatatatcagaaaacacagacaaaggttggacatcagtat
tccagctcaaagcatgttgtccagcagatctcatcgaggatatcaagcagcaagtcaaca
aagaaggagcaggtccaggccactgaggttatggcggaaccagcctatacggtgccagcc
ttcagagagagggcacctgaaggaatggaggaatatcagcgtgtgtcctctcatctggag
agaaatctgacttccctacaggaagagttgcacagtataaggacggcaactcatgagcaa
gtggtgaacattgagataacaaatgaggtgagagcattgaagtatgtcaggacggagctt
ccttatgagattcccaaagtcccagacttcctgttgggtttgagatctcataccgtgtgg
gagaaaactccagtcaagctcttctgcactgtcgctggcactcccaccccgatcgtccaa
tggtataagaatggtgttcctgttgaccctctgagcacacctggaaaatacaaaatcgaa
aacaaatatggagttcacagtctgattattagcagatgcacagtagccgattctgccgtg
tacagcgctgtggctaccaactcccagggaaaggtcacctctaaggccacagtgtgtgtg
agaagaccatctggagcagcagagagctcttatcttccaggccatgcacctttgccctct
gatatccaacgcagcaagctagaagtgaccctgctcgataggtttggagtgacatttggc
acagagggcgagtccttgactctggtggcgaacatggtggtggtgcctgaccttcccaat
ctgccaccagaggttatgtggtatagagatgaaactctgctgacaacatccagatgggct
gagatgcatgttggaggaggggctgccaggctgactcttcctcacctgaacaaggacgat
gagggtctgtacacactgcgcatctggaccaagcaaggaaccaccgagcacagcgcctac
ctgtttgtcaaggatgctgcacccgcagtagctggagcccctggagctcccatggacgtc
accgcctctgacgccaataaggattatgtcctcgtctcctggaagcctcccaatctcact
aatgaggcacccatcaccggttactttgtggacagacgcaaatctggaactaaggactgg
gtccagtgcaatggcacccccgttaaggtgtgcaagcttcccgtgcatggacttaccgag
ggggattcctatcacttccgtgtccgggctgtgaacagcgcaggcatcagcctgccctcc
aggatgtcctctggagtgattgctgctgatgtggaaagtgatgtggaagtgattaaaatc
gaagggaagtatgatattgcaattcgacaggaagacctgcaaggagagtatgttacattg
ccggagcccccaacagatgtgcatgctagtgaaataaatcaaacgtatattgttctgagc
tggaaaccacccactcccagaggacgggcaactgtgtggtacctcatggagaagtcggtg
ggcgacagtaacttgtggcagagagtcgacacaggcatacaaatacgctcaccacgttac
cctctttacgatctggaggacaagaaagcataccgtttccgtgttatcacagtcaacaag
tacggcccgagcgagccatcagagcctacagctctcatccagaaggcagacccttatggc
agcattccaaacatcggcgttccctcagccccgggtaaggtcatggcttctaggaacaca
aaaacatctgcctttgtgcagtgggagtcccccaaacagggcaaaaacctcatgggctac
tatgtggattgctgtgttgttggctccaagacctggatcccgtgtaaccacaggccctac
aagcacaccaggtttgtggtccatggcctgacttctggcgatacatataaattccgcgtc
caggcagtgaatgcctatggtctgagtgaggagtctcaggagtctgatccactcttcatc
gatgctgcaatcgctgttccctctgcaccatacggcatcactctgctcagctgtgatgga
gcctccatgaccctggcctggaaacggcccaaacgcacaggcggaagcaggatcacgtcc
tactacttggataaacgtgaagcagactctgtattgtggaaggaggtcggctcaaggcct
gccacaggcagggtttataaggtggagaatctgactgctggcaccttctatgagtttaaa
gttcaagctggcaatatggctggtgtcggtatgccgtctgaacccagtgtgccatttgct
tgtgaggcctggaccatgcctgagcctggtcctgcatatgacatcagtttctgggaggtg
cgtgatgattctctcttggttcagtggaagtctccagtatacactggggacactcccatc
aaaggctactttttggaaatggccaagaaggggtcctttgattttgttgcagtgaatgca
gaggttgtgaaccatagttacttaaaggtgactggtttggaaaatggagcttcgtatgtg
tttaaagtatgtgcagtgaattctgcaggtagaggaaaagagtcagatgtgtctgaggct
gtgtgtattaaagctctgccaggtacaaaggagattgtatgtggtgtggatgaggagact
ggagatattttcttgtcctttgaggcttgtgagttatctgaggactccaagtttatttgg
tccaagtcttacaaggaaatcagcgaatccaagagggtcaccgcatcagctgtgggaaga
acctccagactgacgttcgcaaacctcgagaaggaagacctgggtctctactctgtggcc
gtgactgatacagacggagtgtcttccagttacaccctcaaggaggaggagctgaaaaaa
ttgcttgaactgagctatcacatcagacatccacttgttcccctaaagacagagctgaat
tatgaagttcttgagaaaggtcacgtgcgtttctggcttcaggccaagaagctgtcctct
gctgcatcctacaggttcatcgttaatgataaggaggtcactagtgctgagggtcacaag
attagccacgatgcttccactggaataatttcgatggtagttgagcactttaccagatcc
aatgagggcacatacactcttcagatccatgacggaaaagctaagaaccaaagctccctg
gtgcttgtgggagatgtcttcaaggccgcgctcaaagaggctgaatttcagagaaaggaa
cacctcaggaaacaaggtcctcatttctcagagtacctgtctttccatgtggatgaagag
tgcactgttaagcttgtatgcaagttggccaatgtaagaaaagacactactttcaaatgg
tttaaagaagatgaagaaataactcttgatgtcgcacccaaccccatgtctggatcctgc
actcttcctatccccttgttttccagaaaagaccagggcacttacaaagctgtactgagt
gatgatcgtggaaaggatatttctgcgtatgaaatttctggccaaatctttgaggatatc
atcaacgccattgcccgcatttctggctcatctgcatctgagctgatgttgcagtgcaca
ccagagggcatcagactgcagtgctacatgaaatactacacagaggaaatgaagaccagc
tggttccacaaggaaagtaaaatcgcctcttcggagaagatgaggatcggaggtacgtct
gaaatggcctggatgcagatctgtgagcctacagacagggagaagggccattataccatt
gagattcacgatggcaaatctgcccacacccgttcctttgacctctctggacaagcatac
attgatgcctatgcggaattccaaagactcaaggctgcagcatttgcagagaaaaaccgt
ggcagagtaatgggtggactgcctgacgtcgtcaccattatggagcataagaccctgagt
ttgacatgcacagtgtggggtgaccccaaacctgaggtcacctggttcaagaacgaacag
gaagtcatttctgacgatcacaaccagatctcctttgaaagcggcaagttcgccagcctc
acgattaaaaccgttacggtggatgattccggcaagtacagcatcaatgtgcgaaacaag
tatggcggtgagtttgtggagatcacagtcagtgtctacaagctgggtgaggacatccct
gaacccaagttgggacagatggcaaaacctacctcagcacccaagtccgttgcaccaccg
tcctcaaagccccagactcctgcaccatccgtgaagagccctacccccagtccagcccag
tcctttaaatccccaaccccaactccatctcaatccgcaaagtcccctcccccagcttcc
aaatctcccaccccacctaggagtgccaagtcccccactccacccagattcatgagatcc
ccaacacccaccaagaagtaa
DBGET
integrated database retrieval system
