Clarias gariepinus (North African catfish): 128543477
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Entry
128543477 CDS
T10780
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
cgar03083
Polycomb repressive complex
cgar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128543477 (rbb4l)
03083 Polycomb repressive complex
128543477 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128543477 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128543477 (rbb4l)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128543477 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
128543477 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
128543477 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128543477 (rbb4l)
PRC2.2
128543477 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
128543477 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128543477 (rbb4l)
Chromatin remodeling factors
NuRD complex
128543477 (rbb4l)
NuRF complex
128543477 (rbb4l)
NuRF complex (fruit fly)
128543477 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
128543477
NCBI-ProteinID:
XP_053369897
LinkDB
All DBs
Position
15:8387781..8400108
Genome browser
AA seq
447 aa
AA seq
DB search
MLSEMADKEESRGEKKEDMKRRGEKKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHA
LEWPSLTVQWLPDVNRPEGKDYAVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYD
SEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPT
KPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKILDA
KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL
SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD
RRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM
QVWQMAENIYNDEEPDTPASELESQAS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagaaatggcggacaaagaagagagcagaggagaaaagaaagaagatatgaag
aggagaggagaaaagaaagaagtatatgatgatgctgtagaagagcgggtaataaatgaa
gaatacaaaatatggaagaaaaacactccttttctgtacgaccttgtcatgacacacgct
ctcgaatggccaagtctaacagtgcagtggctgcctgatgtaaacagaccggagggaaag
gattatgcagttcacagactggtgttgggaacacacacttcagatgagcaaaaccacctg
gtcattgccagtgttcagattccgaacgacgacgctcagtttgacgcttctcactacgac
agcgaaaaaggagagtttggaggctttggttctgtgagtggaaagattgagatcgagata
aagattaatcacgagggtgaggtgaaccgggcgaggtacatgccgcagaacccctgcata
atcgccacaaagacacccacatctgatgtgctggtctttgactacactaaacacccaacc
aaaccagaccccagcggtgagtgcagtccagacctaagactcagaggtcatcagaaggag
ggctatggtctttcctggaatcccaacttgagtggaaacttactcagcgcatcagatgat
catacgatctgtctgtgggacatcagtggggctccaaaggaagggaagattttagatgcc
aagaccatcttcacaggccacacagccgtagtggaggacgtgtcctggcaccttctgcac
gagtcgcttttcggctctgtggccgacgaccagaaacttatgatctgggacacaagatcc
aacaacacgtctaagcctagtcattcagtggacgctcacactgctgaagtcaactgcttg
tccttcaatccctatagcgagttcatcctagccactggctctgcagataagactgtggct
ctgtgggatctgcgcaacctgaagctgaagcttcactcttttgaatcacacaaggatgaa
atattccaggttcagtggtctcctcataacgagactatcctggcatccagtggaacagac
cggcgactcaatgtctgggacctgagtaaaattggagaggagcagtctgctgaggatgct
gaagatggacctccagaacttctgtttattcatggtggccacacagcaaagatctcagat
ttctcatggaatcccaacgagccctgggtgatctgctctgtatctgaagataacatcatg
caagtctggcaaatggctgaaaacatctacaatgacgaggagccggacacccctgcctca
gagctggagagtcaggcctcataa
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