Clarias gariepinus (North African catfish): 128544066
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Entry
128544066 CDS
T10780
Symbol
ube2ka
Name
(RefSeq) ubiquitin-conjugating enzyme E2Ka (UBC1 homolog, yeast)
KO
K04649
ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:
2.3.2.23
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128544066 (ube2ka)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128544066 (ube2ka)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
128544066 (ube2ka)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
128544066 (ube2ka)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UBA
RWD
UBA_7
UEV
UBA_3
UFC1
NOMO1-like_1st
Motif
Other DBs
NCBI-GeneID:
128544066
NCBI-ProteinID:
XP_053369992
LinkDB
All DBs
Position
16:complement(25088305..25098797)
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AA seq
200 aa
AA seq
DB search
MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELKGEIAGPPDTPYEGGRYQLEI
KIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAA
EPDDPQDAVVANQYKQNPEMFKQTARLWSHVYAGAPVSSPDYTRKIDKLCAMGFDKNAVI
VALSSKSWDVETATELLLSN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctaacatcgcggtgcaaaggataaaacgtgaatttaaagaagtccttaaaagcgaa
gagacaagtaaaaaccagattaaagtcgacctggtggatgagaacttcacggaactaaaa
ggggagattgcgggaccgcccgacacaccttacgaaggtggtcgataccagctagaaatt
aaaattccagaaacatatcccttcaatcctccgaaggtacggtttattacaaagatctgg
catcccaacatcagctcagtaactggtgccatatgtctggatattttaaaggaccagtgg
gcggcggccatgacactccggacagtgctgctgtccctacaggcgttattggcagcagct
gaaccagacgatccacaggatgcagtggtggccaatcagtataagcagaacccagagatg
tttaagcagacggctcggctctggtcacacgtttacgcaggtgcaccagtctccagtcca
gactacacacgtaaaatagacaaactctgtgctatgggttttgataaaaacgcagtaata
gtggcactgtcgtcaaaatcctgggacgtggagacggcaacggagttgttgcttagcaac
tga
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