Clarias gariepinus (North African catfish): 128544083
Help
Entry
128544083 CDS
T10780
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128544083 (rbbp6)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
U-box type E3
128544083 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128544083
NCBI-ProteinID:
XP_053370016
LinkDB
All DBs
Position
16:complement(23095862..23117274)
Genome browser
AA seq
1760 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITVSELKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGVKAASKTFLIDRSEPSIGSSKAIDDSPSISLAQLSKTANLA
EANASEEDKIKAMMSQSNHDYDPIHYTKKLVGPPPPNYTCFRCGKSGHYIRNCPTNGQDK
SFEAPQRIKKSTGIPRSFMMEVDDPNIKGAMLTNTGTYAIPTIDAEAYAIGKKEKPPFVP
QEQSSSSDDEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDDCIRTDLLESEEHICPTCN
QSEVSPDALIANKFLRQAVNNFRNETGYTKRIRKTAVQSSAPASQPNPRVQRPVQTLKLL
NSRKQDPLRANTPPQNPPAAVAPPPAVTPPTAITQQSPATTPEVDAPPVASNSSATPTVA
LSPPQQPKQDDAVMPVKEPETQPTSAILPDSLLPTPVIPKGHHVPVISQPHVHTLPLPIP
RSGPPPRHSGPRLTLPRPAWDQSSGRGRPLPNDRHPRAQVPPVQPPPVAPTIYPPSLFPP
PQHTLAHPPGIVPPQYPIPFPQGQQPAPPFNIPPPGFPPAPTTVPNPWAPTGTQPTLPTP
PVPPIPSAHFLSKEEFYRQQRRLKEEEKSKLEEFTNDFAKELLEYRKIQKERRRSYSRSK
SPYRSSYSGSSYSYSKSRSRSRSYSRSLSRSRSRSRSRSRSRSRSRSYSPYSRRGRGRSR
SYRSRSRTPPYHRSRTRSPSYRGRESGGVSGGHYRSRTRSPIYRTHSPGKKLPPASQVDD
RKYGGRYREVPPYDAKAYYGREVDQSDPYERERYREWEREYREWYEKYFKNYEGPQGGQI
RGRPPGGRDTYSPERFAPQRQRENSPYGRGRREEYPPHSIPPRNRPLTYQERCAEKYGHL
HVNNVAVGRGINKEILKPTKEREPTTSTSVDSKGLKHKKHRKKRKGEEGDVFSHSDSMDE
IKKDERKGDSMLMNSSRDDATPVRDEPMDNTSVPYKSASDKEKKEKPKSKTEKPKRKAES
GSQKKEALPKSTKPTREKEVDAVRERVASTEPPIKRIKEDPPQKTDVGKQQLSEKAMLPR
KLMPSRPFKQHQEQKAVKDEPKVKKEPVKDSTRVEKPPAKDGKLKLEKPIKTEEKPLKAS
EMKVEKRKRKEEKPLVKEPEFTQKSPKLEVAEMANVSPKPNPKAEGEKPIPKDKPAIPSL
MDIKPEPVRKIKLNRESGKRIVSTERISSEETGAGKNRLDQKSKLKIRRQVHGTDRSGST
LVDYTSTSSTGGSPIKRHEEKPDLRKTVVKTLEEYTNDSSTPAEDEIVLIQVPRSKWEKE
DFDSEEDDSKVANASSGNGNAPATNPAAAASPPLSTALKPSDKDTNKTLHDSKDVHPEAK
PTKDLSSDKEKDIECERERERAKERDRSNFDRDVSDRKKPVPLNQDRERAQERGSDHGSE
RSSSSQSSRDRLTDRTASTSRKPSSRENSASVGDKKQEHRSSAKDHTDFQQKDTKSKEQL
RKRDSPPPPSKLSIDTMKRVPTASQESKIFEHSPPADRKIVSRESRRAASEDTKALDKAV
HREGAKHSDSRIAKDKEQHKVNQSNTLTETKSDVERSDARVKPPSARSTRLSSDLARETD
EAAFVPDYSESDSEASDPDNKLESKEKRQDSSVSPVHSRSASPTGSHAHSSSPSSPGSQD
SKKKKKDKKEKKEKKKHKKHKKHKKHKKHAGNESESDAKGQKHKHKKKKSKKSKDKDKED
KAKERDEKDKTKDEQNDAHV
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgttcattataagttttcctctaaacttaactacgacacggtaactttcgac
gggctgcacatcaccgtgagcgagctgaagcgccagatcatgggccgggagaagctgaaa
gccgccgactgcgacctccagatcactaacgcacagactaaagaagaatacactgacgat
ggtgctctaatacccaaaaactcatctgtcatcatcagacgaatacccatcggtggtgtg
aaggccgccagcaaaacgtttctcattgatcgatctgaaccatcaattggatcttcaaaa
gccattgatgattctccctccatttctctggcccagctctctaagacggcgaatctcgca
gaagcaaacgcctcggaggaagacaaaatcaaagcaatgatgtcacagtccaaccatgat
tacgaccccattcattacacaaagaagcttgtgggacccccgcctccgaattacacctgt
tttcgctgtggaaaaagtggacactacatccgaaactgcccaacaaacgggcaggataaa
agttttgaggcacctcagcggattaaaaagagcacggggattcctcgcagctttatgatg
gaagtggatgatccaaatattaaaggtgccatgctgaccaacacgggcacttacgccatt
cccaccattgacgctgaagcttatgccattgggaagaaggaaaagccacccttcgtccct
caggaacagtcttcttcctctgatgatgaagatcccgttccagacgagctgctctgtctg
atatgtaaagacctcatgactgatgccgttgtgattccctgctgcggaaacagctactgc
gatgactgtataagaacagatttgttagagtcggaggaacacatttgtcccacttgcaac
cagtcagaagtttctcctgatgctctaattgccaacaaatttctacgtcaggctgtaaac
aacttcaggaatgaaacgggctacaccaagcgaatccgcaaaactgccgttcagagttct
gcccctgcctcccagcctaatccccgggttcagcgccctgttcagacactcaaactttta
aattcccgcaagcaggatccactacgcgccaacacaccaccccaaaacccacctgctgct
gtagctccaccccctgctgtcacaccacctactgctatcactcaacagtccccggcaacg
acccctgaggttgatgctccacccgtggctagtaacagtagtgccacccccacagtggct
ctttctcctccacagcagcccaagcaggacgatgctgtcatgcctgtcaaagagccagaa
acacagccgacatctgccattttacctgacagcctgcttcctacgccagttattccaaaa
gggcaccatgttcctgtcatcagccagccacatgtgcacacacttcctcttcccattccc
agatcaggaccaccaccgagacatagtggcccaagactgacattacctcggcctgcatgg
gatcagtcctcaggccgaggccggcccctccctaatgatcggcacccaagggcacaggtt
ccaccggtccaacctccacctgtcgctcccaccatttatccaccctctcttttccctccc
cctcagcacactttagcccacccacctggcatcgtgcccccacagtacccaataccgttc
cctcaggggcaacaacctgccccccctttcaacattcctcccccaggtttcccccctgcc
ccaacaactgtacccaacccctgggcaccaacaggtactcagcccacactcccaaccccc
ccagtacctccaataccatcagcacattttctgtccaaggaggagttctatagacaacaa
cgtcgactgaaggaagaggaaaagtccaaacttgaggagtttaccaatgactttgccaaa
gagttgctggaatacagaaagatccagaaggagagaagacggtcctattccaggtcaaag
tctccatatcgttcctcctacagtggctcttcttactcctactcaaagtccagatcacgt
tctcgttcctattcacgctctttatcacgatctcgctccagatcacggtcccgctcacgt
tcccgatcacgttctcgctcctactccccatactcccgaagaggcagaggtcgtagccgg
agttatcgttctagatctcgcacacctccataccatcgttcccgaactcgctctccttcc
tatagagggcgagaaagcggaggagtgagtggcggccattatcgatctcgcactaggtca
ccaatatataggactcacagtcctggcaagaaattgcctccagcttctcaggtagatgac
cgcaagtatggaggaaggtacagagaggttcctccatatgatgccaaagcttactatggc
cgcgaggttgatcagagcgacccctatgaaagggagcggtaccgagaatgggagagagag
tacagagagtggtatgagaagtacttcaagaattacgaagggccacaaggtggacagatc
agaggccgtccccctggtggccgagatacatattctccagaacgttttgcacctcagagg
caaagagaaaactcgccgtatggaagggggcgccgagaggagtatccaccacacagcatc
ccaccaagaaatcgtccattgacgtatcaggaaaggtgcgcagaaaagtatggccacctg
catgtcaacaatgtggcagttggacgaggaataaacaaagaaatcctgaaacccaccaaa
gaacgagaaccaaccacaagcacttctgtggactcaaagggtctgaaacacaagaaacat
aggaaaaagagaaaaggggaggagggagacgtctttagtcattccgactctatggatgaa
atcaagaaagatgaacggaagggagactcgatgctgatgaattcgagtcgtgatgatgcc
acacccgtcagagacgagcccatggataacacctctgtcccctacaagagtgcttctgac
aaggagaaaaaagagaaacccaaaagcaagactgaaaaacctaaacgcaaggctgagagt
ggttcacaaaagaaagaagctctgccaaaaagcaccaagcccaccagagaaaaggaagta
gatgccgtgcgtgaaagggtcgcatccactgaaccacccattaaaaggatcaaagaagat
cctcctcagaagactgatgtaggcaaacaacaattatctgagaaagccatgcttcctcgc
aaattgatgccgtctagaccattcaagcaacaccaagagcaaaaagctgtcaaagatgaa
cctaaagttaaaaaagaaccagtcaaagactcaactagggttgagaaacctcctgccaaa
gatggaaaactcaagttggaaaagcccatcaaaactgaagagaaacccctcaaagcaagt
gagatgaaggtggagaaacgcaagcgaaaagaggagaagcctcttgtgaaggagccggag
ttcacacaaaaatctccaaagcttgaagttgccgagatggccaacgtttctcccaagccc
aacccgaaggcggagggcgagaagccgataccgaaggacaagcctgccattccttctctg
atggacataaaacccgaacctgttagaaagattaaactcaatcgtgagagtggaaagagg
attgtgagtactgagcgaatttcttcagaggaaactggtgctgggaagaacagactagac
cagaagtcaaagctcaagatacgacgccaggttcatggcacggaccgatctgggtccacg
ttggtcgattacaccagcaccagctcaaccggtggaagtcccataaaaaggcacgaggag
aaaccggacctgaggaagaccgtggtaaaaacactggaggaatacaccaacgacagctca
acacccgcggaggatgaaatagtcctcatccaggtacctcgctccaaatgggagaaagaa
gacttcgactctgaggaggatgactccaaggtcgcaaatgcttcttctggaaatggtaat
gctcctgcaactaatcctgctgctgctgcttctccccctctttcgactgctttaaaacct
agtgacaaagacactaataaaacactccacgattctaaagatgttcatcctgaggctaag
cccacaaaggacttgtcaagtgataaggagaaagatatcgagtgcgaaagggagcgcgaa
agggccaaggaacgagacagaagcaacttcgatcgcgatgtctcggacagaaagaaacct
gttccattaaatcaggaccgggagcgagcgcaggagaggggaagtgaccatggaagtgaa
agaagctcttcatctcagtcatccagagacagattaactgataggactgcatcaacatcc
aggaagccatcgagtagagaaaacagtgcgagtgttggtgacaagaaacaggaacatcgt
agcagcgcaaaagaccacacagatttccaacaaaaagacacaaaatcaaaagaacagctc
aggaagagagactcgccacctccaccctcgaaattgtccatagacaccatgaaaagggtg
cctactgcgtcccaggagtccaagatctttgaacatagtcctcctgcggacaggaagata
gtgtctcgcgagtccagaagggctgcttctgaggacactaaagctttagacaaggcagta
cacagagaaggagcaaagcactctgatagtcgcatagcaaaggacaaggagcaacacaaa
gtgaaccaaagcaacacattaacagagaccaagagtgacgttgagagaagcgacgcccga
gttaaacctccttccgcccggtccacacgtctgtcatccgacttggcacgggagacggac
gaggctgcgtttgtcccagattacagcgagagtgacagtgaagcctcagatccagataac
aagctggagtctaaggaaaagagacaggacagcagtgtgagccctgtccacagtaggagc
gccagccccaccggaagccatgctcacagcagcagcccgagctcgccaggcagtcaggac
agcaagaaaaagaagaaagataaaaaggaaaagaaggaaaagaaaaagcacaaaaaacac
aagaaacacaaaaaacacaagaagcatgcaggcaacgaatcagaatctgatgccaaggga
caaaaacacaagcataagaaaaagaaatcaaaaaagagtaaggataaggacaaggaggat
aaagcgaaagagcgggacgagaaggacaagacgaaagacgaacaaaatgacgcacatgtt
taa
DBGET
integrated database retrieval system
