Clarias gariepinus (North African catfish): 128544115
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Entry
128544115 CDS
T10780
Symbol
stx18
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04130
SNARE interactions in vesicular transport
cgar04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128544115 (stx18)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128544115 (stx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544115 (stx18)
Membrane trafficking [BR:
cgar04131
]
SNARE
Syntaxin (Qa)
Stx-rER
128544115 (stx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF7165
DUF4559
SNARE
DUF2120
Motif
Other DBs
NCBI-GeneID:
128544115
NCBI-ProteinID:
XP_053370055
LinkDB
All DBs
Position
16:complement(23524980..23537826)
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AA seq
318 aa
AA seq
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MAVDITLLFKASVKTVKTRNKALGVGPESAKDELLRRNRPKNSFSCKAKDVISNITKLKD
FLLQHRKDYVNAGSLLSSDVTRMTDCERDQIDQDAQIFMRTCSDAIKQLRTEAEKTVISA
QMKEHRGAVLDMIEVYLKGVCKLYSEQRAIRVKRVVDKKRLSRLEPEQKTKVEKPQSEDA
EQSVPEESSEKPTSDGGVDLWEDTRVEDELSPEEIQMFEQENQRLVSEMNSLVDEVRHIE
GKVVEISRLQEIFAEKVLHQETEIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWIL
FFLVMCSFSLLFLDWYDS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatatcactctgctgttcaaggcgagcgtgaaaacggtgaagacgcgcaac
aaagcgctcggtgtggggcccgagagtgcaaaggacgagctgctgcggagaaacagaccg
aaaaacagcttctcctgcaaagccaaggacgtgatctccaacatcaccaagcttaaggat
ttcctgctacagcacagaaaggactacgtgaacgccggcagtttactctcgtcagatgtg
actcgtatgactgactgcgagagagaccagatcgatcaggacgctcagatcttcatgaga
acgtgttcggatgccatcaaacagctaagaactgaagcagagaagaccgtgatttctgct
caaatgaaggagcaccgcggggctgtgctggacatgatagaagtctaccttaaaggtgta
tgtaagctatattcagagcaaagagcgatccgtgtgaagagggtggtggataagaagaga
ctgtctcggctggaaccagaacagaaaactaaagtggaaaaacctcagagtgaagatgca
gagcaaagtgtaccggaggaaagcagtgagaagccaacgagtgatggtggtgttgacctg
tgggaggacaccagggtggaggacgagctctcacctgaggaaattcagatgtttgaacag
gagaatcagaggctggtgagtgagatgaatagcctggtggatgaagtaaggcatatagaa
ggtaaggtggtagagatttcgcgactgcaggagatttttgctgagaaggttctgcatcag
gagacagaaattgataacattcatcagctggttgtcggagccaccgaaaatgttaaagaa
ggcaatgaagacattcgagaggcaatcaagaataatgcaggttttcgcgtctggatcctc
ttcttcctggtcatgtgctccttctctctgctcttcctggattggtatgacagctaa
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