Clarias gariepinus (North African catfish): 128544116
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Entry
128544116 CDS
T10780
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgar04054
]
128544116
Pattern recognition receptors [BR:
cgar04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128544116
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GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
128544116
NCBI-ProteinID:
XP_053370058
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Position
16:complement(4981621..4985695)
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AA seq
933 aa
AA seq
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MHLFSSAVFTNLLACTLCWVSEKCVVFEDYVDENIVDECPKSNLTGTCKGVSNVALDLAG
IPSHLEVLCLHYSKDLSLHPNSFSRFTKLTSLIIMGSISTVLPGAFKNLLNLKTLEITCS
ESLNISFSSEIFSDLQNIETLFIVHCKLSSMTIDVFKGMVKLENLGLQKSIEDFSELLCR
LTFVSSSLNYLDVFAENLVNVSTPICAFSNGTSFDVKFHKFKTLYLEFNKVNVMNKTVMR
YFPKINVLKTHSTTFEVLKSEFTNIHTLGVSYSSEFSSFEEICKATHDFSTTHIIVSFPN
VTESFVPDLERCMGLEHLFIYCREQCTAMNLTFINVLKNLTLLLIKWKLTPESIKRDRAL
ALCENQSDLITKLKTVNLFTNNFIRIGPRHFSCLQELEELYWAKSEIEHIEDFTFNSTRF
LTILDLSRNKISQLTNFTFFGLSNLKTLLLQENKLLMIETWTLLPLTSVEFVNLGVFQYS
SSEPSKIQINLSLPEKLTKLSLSSGIRPMTLILSKSKKSQVGLSLNVCGQSVTFQDCDNT
LFKSLVELTAETEQLLCGQSFPGQFLKSLRHLMIKANHKTGQMDLTDLNQLVNLKSLILF
NVDLSRQSGLDVIFRNLSSLEYLCMSFCSVPLLEKDLSRDLKSLKVMFLQADDLFSVMEN
FIEPLKNLRYLILKDALLHCSCDNAWITNWAKYEKNVQVNFRDSALERLPCKTADETKFL
QKYAQENCSFNVDFLLFVSTSLGLVFFMLVVLLHQLFGDYLLAFFHIAWAWVEEAMRANR
KGHYHFDVFVSYSGKDERWVMDELLPNLGKRGPPFLKICLHSRDFELGKDIVENITDSLY
RSRHTLCLVSRNYLRSTWCSLEMRLATYRLLAEHRDVLVLVFLEKVSHQLLNVHHRLSRL
VKTRTYMDWPHDPALHNAFWDRLWKKLAPESAT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttttcttcagctgttttcacgaaccttctggcttgtacgctgtgttgggtg
tctgaaaaatgcgttgtttttgaagattacgtggatgaaaacatagtggatgaatgtcca
aaaagtaacctaacaggaacctgtaaaggcgtctccaatgtggcactcgatcttgctggg
attccatctcatcttgaggtcctctgtttacactattcaaaggatttgtctctgcatcct
aactctttctcaaggtttacaaagctcacaagcttaataatcatgggatctatctcaact
gtcctccctggagcttttaaaaatcttttaaatctgaaaacactggaaattacctgctca
gaatcattgaacatttccttttcatctgagattttcagtgaccttcaaaacatcgaaaca
ctttttatcgtccactgcaagctttcatccatgacaatagacgtgttcaaagggatggtg
aagttggaaaatctcggattacaaaagagtatagaggacttttctgagttgttgtgcaga
ttaacatttgtgtcatcgtcattaaactatttagatgtatttgctgagaatttagttaat
gtttcaacgccaatttgtgctttttctaacgggacttcttttgatgtcaagtttcataaa
tttaagaccctctatcttgagtttaataaggttaatgtaatgaataaaacagtgatgaga
tatttccccaaaattaatgttttaaaaacacattctactacgtttgaagttttaaaatct
gaatttacaaacattcacactttaggtgtatcttattctagtgagtttagcagctttgaa
gaaatctgtaaagccacacatgacttttcgacgactcacatcattgtgtcattcccaaat
gtaaccgagtctttcgtgcctgatctggaaagatgcatggggcttgaacatctttttatt
tattgtagagaacaatgtacagcaatgaatttaacattcatcaatgttctaaaaaatctt
acattattgttgattaaatggaaacttactccagagagcattaaaagggacagggcattg
gcactatgtgaaaatcagagtgatcttatcacaaaactcaaaacagtaaatctttttaca
aacaatttcataagaattggccccagacattttagctgcctacaagaacttgaggaactg
tactgggctaaaagtgagattgaacatattgaagattttacatttaacagtacaagattt
cttacaattttggacctcagtcgtaataaaatatctcaactcacaaactttaccttcttc
ggtttatctaacctaaaaactctcctacttcaagaaaataagctgcttatgattgagacg
tggactttacttcctttaacatctgtagagtttgtaaatttgggagtttttcagtattcc
tcctctgaaccatcaaagatccagatcaacctcagccttcctgaaaaattgactaagttg
tccctcagttctggaatacgaccaatgactcttattttaagtaagagcaagaaatcccag
gtggggcttagcctcaatgtttgtggccagtctgtgacttttcaggattgtgacaatacg
cttttcaaatctcttgttgaattaactgcagagacagagcaattgctctgtggtcagtcc
tttcctggtcagttcctcaagtctttgagacatcttatgatcaaagcaaatcacaaaaca
ggacaaatggacttgacagatttgaaccaactggtcaacctgaagagtctgatcctcttt
aatgtggatttgtctcggcagtctggtcttgatgtgatttttcgcaacttgtccagtctg
gagtatctctgtatgtccttttgctcagtgcctttattggagaaagacttgagcagagac
ctgaagtcactaaaagtcatgtttttgcaagcagacgatttgtttagtgtgatggaaaac
tttatcgagcccctgaaaaaccttcgctatctcatcctaaaagacgcacttctacattgt
agctgtgacaatgcttggattaccaactgggcaaaatatgaaaagaacgttcaggtcaat
tttcgtgatagcgcattggaaaggttaccatgtaaaactgcggatgaaaccaagttcctg
cagaaatacgctcaagaaaattgttcttttaatgtggactttcttctttttgtctccact
tctctgggactggtgttcttcatgctggtagtgctgctccaccagctgtttggagattac
ctgctggctttctttcacatagcttgggcctgggtagaggaagccatgagggcaaacaga
aaaggacattaccactttgatgttttcgtgtcttactcagggaaggatgagcgctgggtg
atggatgaacttctgcccaatctggggaaacgtggacccccattcctcaaaatttgcctg
cacagcagggactttgagttaggaaaggacattgtggagaacatcacggacagcctctac
agaagcagacacaccctgtgcctggttagtcgcaactacctgcggagtacctggtgctct
ctggagatgcgtctggcaacatacaggctgctggctgaacacagggatgttcttgttctg
gtctttctggagaaggtttctcatcaactcttaaatgtacatcatagactgtcccggctg
gtgaagacacggacctacatggactggccacatgacccggcactgcacaatgcattctgg
gatagactgtggaaaaaactcgcacccgaatctgcaacctag
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