KEGG   Clarias gariepinus (North African catfish): 128544148
Entry
128544148         CDS       T10780                                 
Symbol
elob
Name
(RefSeq) elongin-B isoform X1
  KO
K03873  elongin-B
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128544148 (elob)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgar04121]
    128544148 (elob)
   03400 DNA repair and recombination proteins [BR:cgar03400]
    128544148 (elob)
Ubiquitin system [BR:cgar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     128544148 (elob)
   Cul5 complex
     128544148 (elob)
DNA repair and recombination proteins [BR:cgar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128544148 (elob)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 128544148
NCBI-ProteinID: XP_053370115
LinkDB
Position
16
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRAPEEQRLYKDDMLLEDSKTLGDC
GFTNQTARPQAPATVGLAFRISDDTFEPLRVDAFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtgtttctaatgatccgacgtcacaagacgaccatcttcacagacgccaaggag
tcgaccaccgtctacgagctgaagcgcatcgtcgagggcatcctgaagagggcgcccgag
gagcagaggctctacaaggacgacatgttgttagaggacagtaagactctgggagactgc
ggcttcacgaaccagacggcgaggcctcaggctccagctacagtgggtctggccttccgt
atcagcgacgacacgttcgagccgctgcgtgtggacgccttctccagcccccccgagctg
ccggacgtgatgaagccccaggactcgggcagcacggccaacgagcaggctgtgcagtga

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