Clarias gariepinus (North African catfish): 128544157
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Entry
128544157 CDS
T10780
Symbol
ntn1b
Name
(RefSeq) netrin-1b
KO
K06843
netrin 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128544157 (ntn1b)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Axon guidance molecules
128544157 (ntn1b)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
128544157
NCBI-ProteinID:
XP_053370125
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Position
16:16638789..16684986
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AA seq
602 aa
AA seq
DB search
MLRLFVAWSTLVALCVMVEGARGGGYGMSMFAAQSSPPDPCYDENGNPRRCIPDFVNAAF
GKDVRASSTCGTPAARYCVVSEKGDERTRDCHTCDATDPKKAHPAAYLTDLNNPHNLTCW
QSESYVQHPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWTPFQFYSTQ
CKKMYNRPSRAAITKQNEQEAICTDSHTDMQPLAGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIKVTFSRLHTFGDENEDDSELARDSYFYSVSDLQVGGRCKCNGHASKCVRDRDG
NLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVPCHCNLHARRCRFNMELYKLS
GRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPISHRRACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTATYISPEEPSDCESHCKASK
GKMKVTMKKYCKKDFAVQVHVLKGDKAGEWWKFTINIISVYKQGGHRIRRGDQLLWVRAK
DVACKCPKIKPGRKYLLLGSDDEDSRGQSGVVADKASLLVPWKDQWARRLRKFQQRDKRG
KC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggctgttcgtggcttggagcacgctcgtggctctgtgcgtgatggtggaggga
gcgcgcggcggcgggtacggcatgagcatgttcgccgcgcagtcctccccgcccgacccg
tgctacgacgagaacggcaacccgcgacgctgcatcccggacttcgtgaacgcggcattc
ggcaaggacgtgcgcgcgtccagcacgtgcggcactccggcggcgcgctactgcgtggtg
agcgagaagggcgacgagaggacgcgcgactgccacacgtgcgacgcgaccgacccgaag
aaggcgcatccggccgcgtacctcaccgacctcaacaacccgcacaacctgacgtgctgg
cagtccgagagctacgtgcagcacccgcagaacgtcaccctcacgctctcgctgggcaaa
aagttcgaggtgacctacgtgagcctgcagttctgctctccgcggcccgagtccatggcc
atctacaagtcgatggactacggcaagacatggacgcctttccagttctactcgacgcag
tgcaaaaagatgtacaaccgaccgagtcgcgcggccatcaccaagcagaacgagcaggag
gcgatctgcaccgactcgcacacggacatgcagccgctcgcgggcggcctcatcgcgttc
agcactctggacggcaggccgtcggcgcacgactttgataactctcccgtgctgcaggac
tgggtcacggccactgatatcaaggtgacgttcagccgcttgcacacgttcggcgacgag
aacgaggacgactcggagctcgccagggactcgtacttctactcggtgtctgatctgcag
gtggggggccgctgcaagtgtaacggacacgcgtcgaagtgcgtgcgcgaccgcgacggc
aacctggtgtgcgagtgcaaacataacactgcgggacccgagtgcgacaggtgcaaaccc
ttccactatgaccggccgtggcagcgcgcgacagccagggaggccaacgagtgcgtccct
tgtcactgtaacctacacgctcgccgctgtcggttcaacatggagctgtataagctctca
ggacgcaggagcggaggagtttgcctcaactgcagacacaacaccgccggacgccactgt
cactactgcaaagagggctactaccgagacatgacgaagcccatctcgcacagacgagcc
tgcaaagcgtgtgactgtcacccagtcggtgctgcagggaagacctgtaaccagaccaca
ggccagtgtccgtgcaaggatggtgtgactggtattacttgcaaccgctgtgctaaaggc
taccagcagagtcgctcacccatcgccccatgcatcaagattccagtcgcatcccccact
gcaacgtacatcagtcctgaagaaccatcagattgcgaatcccattgcaaggcctccaag
ggcaaaatgaaggtcaccatgaagaaatattgcaagaaggactttgctgtccaagttcat
gtgctgaagggtgacaaggcaggcgagtggtggaagttcaccattaacatcatctcggtg
tacaagcagggcgggcatcgcatccgacgtggtgaccagctgttgtgggtacgtgccaag
gacgtggcctgcaagtgcccgaagatcaagccaggcaggaagtacctgttactgggctca
gacgatgaggactcacgtggccaaagcggtgttgtggctgacaaggccagcctgctcgtc
ccctggaaggaccagtgggcccgtcgcctccgcaagttccagcagcgtgacaagaggggc
aaatgctga
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