Clarias gariepinus (North African catfish): 128544204
Help
Entry
128544204 CDS
T10780
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgar01100
Metabolic pathways
Module
cgar_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128544204 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128544204 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128544204 (xylt1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
128544204 (xylt1)
Glycosyltransferases [BR:
cgar01003
]
O-Glycan biosynthesis
Glycosaminoglycan
128544204 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
FXMR_C2
Motif
Other DBs
NCBI-GeneID:
128544204
NCBI-ProteinID:
XP_053370216
LinkDB
All DBs
Position
16:30893822..30954057
Genome browser
AA seq
911 aa
AA seq
DB search
MPVGGACARKSARRSRSALIAALTVLLVQTLIVWNFSSLDSGDTGGTGGGATGGGGGGGG
AVREKRDRLGENKAYGENRRAGGEQLGRGSLRHERQTEVGYSHRPKEKVRVDSNNENSVP
KDFESIDNSNFAERLRPKRHASSKRQQETSEKNKNSNELVHNGLNRTGAGPGRDSALTPV
PSPRQKSQQVKKPGVGPPAIKYDQPPKCEITGKEAISALSRAKTKECRQQIAEVYCRHKD
KQLMPEKVTRYCPLEGKASVNVHWEEDSMETAPAVPVRIAFVLVVHGRASRQVQRLFKAI
YHTSHFYYIHVDQRSDYLYRQMLALAKRYPNVRVTPWRMATIWGGASLLSMYLQSMKDLL
AMSHWPWDFFINLSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFF
ECDTHMWRLGDRKIPEGITVDGGSDWFLLNRAFVDYVINSEDDLVTSMKRFYAYTLLPAE
SFFHTVLENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQ
TARPTFFARKFEASVNQEIVNQLDAFLFGSYPQGTPGLKAYWENIYDEPDGVHSLSDALL
THYHAFARLGLARAANSLQGDANDNRCRYYAMGHPVAVHIYFLFDEFQGYLVKHHATNLA
TSKLETLETWVMPKKFFKFTSPPSSSNRLQYAEIGTDWDAKERIFRNFGNLMGPLDELVG
MQKWAKGSNVTVTVVWIDPTNVIAATYDVLIDSTAEYTHYRPPLNTPLRPGMWTVRVLHH
WNPVAETRFLITPLTHHKHLPIRQDDALKVHNGPPKNSYMDQSFHGLNPILNIPVRLREV
EEAERNAGLTGMRLERWVDGLVGEVWAAADVCSATPSGCPVLQSCRDTAWSSLSPDPKSQ
LGPPKSNGTIR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcggcggtgcgtgcgcgcgcaagtcggctcgccgctcgcgctccgcgctgatc
gccgcgctcaccgtgctgctcgtgcagacgctcatcgtgtggaacttcagcagcctggac
tcgggggacaccggggggaccggcgggggggcgaccggaggaggaggaggaggaggaggc
gcagtgagggagaagagagaccggctcggggagaacaaagcgtacggggagaaccggcgg
gccggcggggagcagctcgggagggggagtctccgccacgagcggcaaacggaagtcggc
tactcgcaccgtcccaaggagaaggtccgtgtggacagcaacaacgagaactcggtcccc
aaggacttcgagagcatcgacaacagtaactttgcggagcgtcttcggccgaaacgtcac
gcgtccagcaagcggcagcaggagacgtccgagaaaaacaagaactccaacgagctcgta
cacaacgggctgaaccgtacgggggcggggccggggcgggattccgcactcacgccagtc
ccttcaccgcggcaaaaaagccaacaggtcaagaagccgggcgtcggcccgccggctatc
aagtatgaccaaccgcccaaatgcgagatcacgggcaaggaggctatctcggctctgtcg
cgcgctaaaaccaaggagtgcagacagcagatcgccgaggtgtactgtcgacacaaagac
aagcagctcatgcctgagaaggtcactcgctactgccccctagagggtaaggcgagtgtg
aacgtgcactgggaggaggactccatggagacggcgccggccgtacctgtgcgtatcgcc
ttcgtgctggtggtccatggccgcgcctcgcgccaagtgcagcgcctcttcaaggccatt
taccacacctcacacttctactacatccacgtggaccagcgctcagactacctctacagg
cagatgctagctctggctaagcgctacccgaacgtccgcgtgacgccctggcgcatggcg
acgatctggggcggggccagtcttctcagcatgtacctgcagagcatgaaggacctcctg
gccatgagccactggccctgggacttcttcatcaacctgagcgcggccgactaccccatc
aggactaatgatcagctggtggcgttcctctccaagtaccgcaacatgaacttcatcaag
tctcatgggagagataacgctcgattcatcagaaaacagggcctggaccggctcttcttc
gagtgcgacacacacatgtggcgtctgggggacaggaagatccccgaaggcatcaccgtg
gacggaggatccgattggttcctgctgaaccgcgccttcgtggactacgtcatcaactcc
gaggacgacctggtgaccagcatgaagcgcttctacgcttacacactcctgccagccgag
tcgtttttccacacggtgctggagaacagtcctcactgcgagagcatggtggacaacaac
ctgcggatcaccaactggaaccgcaaactgggctgcaagtgccagtataagcacatcgtg
gactggtgtggctgctcccccaacgacttcaaaccctctgacctgccccgcttccagcaa
acggctcggcccacgttctttgcgcgcaagtttgaggccagcgtgaatcaggagatcgtg
aatcagctggacgccttcctgtttggaagttaccctcaaggcacgccaggactcaaagcc
tactgggagaacatttatgatgaacctgatggtgtccacagcctgagcgatgccctgctc
acccactaccatgccttcgcccgcctcggcctggcacgggctgccaactccctgcaagga
gacgccaacgacaaccgttgtaggtactatgcaatgggacatcctgtggctgtccatatc
tacttcctgtttgatgagttccagggttacctggtgaagcatcatgccaccaacctggct
accagcaagctggagactctggagacctgggtgatgcccaagaagttcttcaagttcacg
agtccaccgagcagctccaacagactgcagtacgccgagatcgggacagactgggacgct
aaggagagaatcttccgcaatttcggtaatctgatgggtccgttggacgagctggtgggg
atgcagaaatgggccaaagggtccaacgtgacagtgacggtggtgtggattgaccccaca
aacgtgatcgctgccacctacgatgtcttgattgactccactgctgagtacacacactac
aggcctccgctaaatacacccctgcggcccggcatgtggacagtccgagtgcttcaccac
tggaacccagtggccgagacccgcttcctcatcacaccgcttacccaccataaacacctg
cccatccgacaagacgatgccctgaaggtgcacaacggcccacccaagaacagctacatg
gatcagagcttccacgggctcaaccccatcctgaacatcccggtgcgtttgcgcgaggtg
gaggaggcggagcgtaatgctgggttgacgggcatgcggttggagcgctgggtggacggt
ctggtcggcgaggtgtgggcagctgcggacgtttgctcagcgacgccctccggctgtcct
gtcctgcagtcctgcagagacacggcatggagctcgctcagccccgatcccaaatcacag
ctcgggcctcccaaatccaacggcaccataaggtag
DBGET
integrated database retrieval system
