Clarias gariepinus (North African catfish): 128544216
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Entry
128544216 CDS
T10780
Symbol
snrnp70
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128544216 (snrnp70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128544216 (snrnp70)
Spliceosome [BR:
cgar03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
128544216 (snrnp70)
Complex B
128544216 (snrnp70)
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
128544216
NCBI-ProteinID:
XP_053370237
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Position
16:complement(5180011..5190216)
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AA seq
503 aa
AA seq
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MTQFLPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYSGIAPFIKHFEDPRDAPPPTRA
ETREERLERKRREKMERRQGVVETELKLWDPHNDPNAQGDAFKTLFVARINYDTTESKLR
REFEVYGPIKRIYIVYNKRTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWHPRRLGGGLGGTRRGGADVNIKHSGRDDASRYDDRPIGSDRDRERGERRERSR
ERDREKERGERRRSRSRERRRRTRSRERERALGGGGGGGGGGGGGGPPEESGSRRRDRER
ERGEAEVKPRERSRERDRERDRKRRSRSRERRRDRDRGKGAEGGEEGAGGLTDGIMGDGG
ERGIEEPAVNEQEGGPEGEERGRDRDRERDRDRDRKRSHRDKDRDRDRERRRDRDRDRDR
EHKRDRGDRERREDRHSSLLPPMGENEGLGNGEEGDGSLPPQMEEGSQDGLNAMMMDQDS
MQSGEGYVSNENGYKIEPQGDEY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtttctgcccccaaacctgctggcactatttgccccgcgggatccgataccg
ttcctgcctcagttggagaaacttcctcatgaaaagcatcataaccagccttactcgggc
atcgctcccttcatcaagcacttcgaggatcctagagatgctccaccaccaacaagagct
gaaacgcgagaggagagactggaaagaaagaggcgtgagaagatggagagaaggcaagga
gtcgtagaaaccgagctgaagttatgggatcctcacaatgacccaaacgcacaaggagac
gctttcaagaccttattcgtagctcgtattaactacgatactacagagtccaaactgcgt
cgtgagtttgaggtctatggccccatcaaacgaatctacatcgtgtacaacaagaggaca
ggaaagccacgcggctacgccttcatcgagtatgaacatgagcgagacatgcactcggcc
tacaagcatgcggacggtaagaagattgatgggcgcagagttctcgttgatgtagagaga
ggccgcaccgtgaaagggtggcaccctcgtcggctgggtggaggtctgggtggtaccagg
agaggtggagcagatgttaacataaagcattccggtagagacgacgcttcccgctatgat
gaccgacctattgggagcgatcgggatcgtgagcgtggagaacggcgcgagcggagccgg
gaacgcgacagagaaaaggagcgcggcgaacgccgacgctctcgctcacgtgaaaggcgg
agacgcacccggtcacgggagcgtgaaagggcgctgggaggaggaggaggaggaggggga
ggtggaggtggaggaggaccaccagaggagagcggcagccgacgcagggaccgagaaagg
gagaggggagaagcggaggtcaagccacgagaaagaagccgagagcgtgaccgcgaaaga
gatcgcaaaaggagaagcaggagcagggagaggaggagagacagggataggggaaaaggc
gcagagggaggtgaagagggcgcaggcgggctgaccgacggcataatgggagatggagga
gagagagggatcgaagagcctgctgttaatgaacaggagggaggaccagagggagaagag
cgaggaagagatagagacagagagagggacagagaccgcgataggaagcgtagtcacaga
gataaagacagggacagggacagagaaaggaggcgggatcgagaccgtgacagagatcgt
gagcataagcgtgacaggggcgaccgcgagcgccgagaggatcgacacagctctctgctt
ccccctatgggtgagaacgaaggcctggggaacggagaagaaggggacgggtctctccca
ccgcagatggaagaaggttcacaggatgggttgaacgccatgatgatggaccaggactcc
atgcagtccggagagggttacgtgtctaatgagaacggctacaagatagagccccagggt
gatgagtactaa
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