Clarias gariepinus (North African catfish): 128544230
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Entry
128544230 CDS
T10780
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
cgar04137
Mitophagy - animal
cgar04144
Endocytosis
cgar04340
Hedgehog signaling pathway
cgar04350
TGF-beta signaling pathway
cgar04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128544230 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128544230 (smurf2)
04350 TGF-beta signaling pathway
128544230 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128544230 (smurf2)
04137 Mitophagy - animal
128544230 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
128544230 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544230 (smurf2)
04121 Ubiquitin system [BR:
cgar04121
]
128544230 (smurf2)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128544230 (smurf2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128544230 (smurf2)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128544230 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
128544230 (smurf2)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
HECT type E3
128544230 (smurf2)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128544230 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
128544230
NCBI-ProteinID:
XP_053370262
LinkDB
All DBs
Position
16:16920066..16970806
Genome browser
AA seq
764 aa
AA seq
DB search
MSNQGGRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKLDSITISVWNHKKIHKKQGAGFLGCVRLLSNSINRLKDTGYQRLDLNKL
GPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RSTQWERPTRPASEYSSPGRPLSCLVDENTPIMTPNGAAGAQTGEIRVQERRVRSQRHRN
YMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRGAGEAPNSRVSQLK
EQAQSVLSPGNLPDDAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFE
ESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDI
YTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMES
VDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDTKKEYVRL
YVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDVNDWKSNTRLK
HCTPDSNIVKWFWRAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQID
ASTDNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggaggaaggagaaatggtccggtgaagttgcgtttaacagtactgtgt
gcaaagaacctggcgaagaaagacttctttcgcctgcctgacccctttgccaaggtggtg
gtggacggttcaggacagtgtcattccacagacactgtgagaaacactcttgaccccaaa
tggaaccaacactatgacctatacatcggcaagttggactccatcactattagtgtgtgg
aaccataagaaaatccacaaaaagcagggagctggctttctgggctgtgtacgtctcctg
tccaactccatcaaccgcctcaaagacacaggctatcagagattagatctaaacaagttg
ggacccaatgacagtgacactgtgaggggtcagatagtagtgagtcttcagtccagagac
aggattggcactggtgggcctgtggtggactgcagccgcctgtttgacaatgatctaccc
gatggctgggaggaaaggagaacggcgtctggtcggattcagtacctgaaccatatcaca
cgcagcacgcagtgggagagaccaaccaggccggcatcagagtactctagtcctggtcgc
ccccttagttgtttggtcgacgagaacacacccatcatgacacccaacggggcagctggc
gctcagacaggcgagatccgagtgcaggagcggcgcgttcggtctcagagacacagaaat
tacatgagccggactcacctgcacacaccgccggacctccctgagggctatgagcagcgg
accacgcagcaaggtcaggtgtactttctgcacactcagacgggtgtcagtacgtggcat
gaccccagagtgccaagggatctcagtaatgtgaattgtgaggagctagggcctctgcct
ccaggctgggagattcgcaacaccgccacaggccgcgtctactttgttgaccacaacaac
cgaacgacacagttcacggacccgcggctctctgccaacctgcaccttgtcctcaatccc
agtcctaatggttcaagaggtgctggtgaagctccaaacagtcgtgtgagtcagctaaaa
gaacaggcccagtccgtgctgtctccaggaaatctgcccgatgatgccgagtgtctcacc
gtgcccaagtacaaaagagatctggtgcagaagctgaagattctccggcaggagctttct
cagcagcagccccaggcaggacactgccgcatcgaggtgtcccgcgaggagatctttgag
gagtcttataggcaggtgatgaagatgagaccaaaagacttgtggaagagactgatggtg
aagttcagaggagaagaagggctggattatggaggggtagcaagagagtggttatacctt
ctgtctcatgagatgctgaacccatactatggactcttccagtactcacgcgatgacatc
tacacgctgcagatcaacccggactctgcggtcaacccggagcacttgtcctattttcac
tttgtgggccgcataatgggtatggcagtgttccacggtcactacattgacggcggcttc
actctacccttctacaagcagctgctgggaaaacccatcactctggatgacatggagtct
gtggatcctgatctccacaatagccttgtctggatccttgacaatgacatcacaggggtg
ttagaccacacgttctgtgtagaacacaacgcatatggagagatcattcagcatgagctc
aaacccaatgggaagagcattccggtcactcaggacaccaagaaggaatatgtcaggctt
tatgtgaactggcgcttcctgagaggcattgaagcacagtttctagccctgcagaaaggc
tttaatgaagtcatcccgcaacatctgctcaaagcctttgacgagaaagagctagagctc
atcgtgtgtggcttgggaaagatcgatgttaatgactggaagtccaacacacggttgaag
cactgcacccctgacagcaacattgtgaagtggttctggcgcgccgttgaatcgttcgat
gaggaacgcagagctagactgttacagtttgtcaccggctcgtccagagtgccgctgcag
ggtttcaaagccttacaaggagctgcaggtccacgtctgttcaccattcatcagattgat
gctagcactgataacctgcccaaggctcacacatgctttaaccgcattgacattcctcca
tatgaacactacgacaagctttatgacaaactcctgacagccatagaggagacttgtggc
tttgctgtcgagtga
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