Clarias gariepinus (North African catfish): 128544271
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Entry
128544271 CDS
T10780
Symbol
scn1bb
Name
(RefSeq) sodium channel, voltage-gated, type I, beta b isoform X1
KO
K04845
voltage-gated sodium channel type I beta
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04261
Adrenergic signaling in cardiomyocytes
cgar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128544271 (scn1bb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128544271 (scn1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128544271 (scn1bb)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128544271 (scn1bb)
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GFIT
Motif
Pfam:
V-set
ig
Ig_3
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
128544271
NCBI-ProteinID:
XP_053370284
LinkDB
All DBs
Position
2:10330080..10339336
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AA seq
268 aa
AA seq
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MDRFQYLTCLMCVLGVTLLRADVCPSRTHLRIVHSLRMAPTAHHFLSSMTARCFLFLGVL
CALWVSLCNGACAEVDSDTEAVAGNGFKLGCISCKMRGEVVASAIADWYFRAKGETEFLH
IYTYDGETSIIIDDRFEDRVAWNGSRKTTDLQDASIYLHNVTFNDSGVYRCFFRRTLEYN
AYPYETTISKVVHLTVVAKATRGTASIISEVMMYVSIIGLQLWLLVEMIYCYRKIAAAGD
EALRASAEEYLAIASESKDNCTGVQVAE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttcaatatttgacatgtttaatgtgtgttttaggcgtaactcttttgcgt
gcagatgtttgtccttcacgtacacatctcaggattgtgcatagtctcaggatggcacca
acagcacaccacttcctgtcaagcatgactgccaggtgcttcctgttcctgggtgtactc
tgtgctctctgggtctccctgtgtaacggggcgtgtgcagaagtggactccgacactgaa
gcagtagccgggaacggctttaaactcggctgcatttcctgcaagatgagaggagaggtg
gtggccagcgctattgccgactggtatttcagggccaagggagagacagagtttctacat
atctatacttatgacggtgagacgtctattataattgatgaccgcttcgaagaccgcgtg
gcctggaatggaagtagaaagaccaccgatctgcaggatgcctctatctacctccacaat
gtaaccttcaacgattcgggagtatatcgctgctttttccgtcgaaccctcgaatataac
gcctacccgtatgagactaccatcagcaaggtggtgcacctgacagtggtggccaaagcg
acacgcggcacggcctctatcatttcagaagtaatgatgtacgtgtcaatcattgggctg
cagctgtggctgttggtggagatgatctattgctacagaaagattgctgcagccggagac
gaggccctcagagccagcgcagaggagtatttagcaatagcgtcggaaagcaaagataac
tgcacaggagtgcaggtggcagaataa
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