Clarias gariepinus (North African catfish): 128544341
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Entry
128544341 CDS
T10780
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128544341 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128544341 (abca3b)
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128544341 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_22
RsgA_GTPase
AAA_23
SRP54
AAA_29
Cas6_I-A
Motif
Other DBs
NCBI-GeneID:
128544341
NCBI-ProteinID:
XP_053370329
LinkDB
All DBs
Position
16:21699020..21752592
Genome browser
AA seq
1710 aa
AA seq
DB search
MALWRQFGLLLWKNYLQQKRQILVTLVEITLPLLFSAILIALRQKVSFTNYPNATHYSSF
SLEWPPAFLPYGLQLAYVPGNSSIVRQVAEDVQLSLKAGFISAVRGFETEHQFEEFVKTD
PESAKILAAVVFEHSFTQDDEPLPLQVSYDLRFTYSPRNAPSREKSELNPNNDLDWHTLS
LFPLVQLPGPREQHDSYGGTPGYYREGFLMIQHAVDRAIMKAYNRTAATALFMQTWVVLS
RFPYPAFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAIVQEKERKLKEYMKMMGLSNWL
HWSAWFFMFFLFLSISIFFVTLLICVQVSPNGAVLTYSDPTLVFVFLLVFAVATISFCFM
ISSFFSRANVAAAASGFLYFFSYLPYLFLWPRYDLLTHSQKVSACLISNVAMAMGAQLIG
MFEGKGIGIQWSNLFEPVTVDDDFSLAQVLGLLLLDAILYSLVAWYIEAVFPGEYGMPRP
WYFFILPSYWCNSPRVALVKEKEEEEDAEKALKGEFIEEEPTGLVSGVKIKHLTKVFKMG
NKTKEAVKDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMV
LIRRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPCEQIPDEVERIMLILNLEDKKNARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHF
MDEADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDAMCNVSEISRLVHMYVP
NATLESSAGAEISYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTVDDASSISGMTDVTDFTDSGTLISEDCSNIKLN
TGAKLYIQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVALVVAQTLPGQHKTPELHL
ALSRYGQTTVPMALDSDAGPLATALAEAYAAQLATQTVTPVTNLTDFSEYVLNNAMREGG
AFNEHCVVGAAFRGRTSRFAEITGYFNNQGYHTPATALMLVDNALYRLLAGPNASIQTGN
KPMPRNMSEIAQSQLSQGQTGFAIAINLMYGMASLASTFALLLVVERSVKSKHVQRVSGV
YISNFWFSALLWDLINFLLPCLLMLVVFRAFGVKAFVEENHLVDVLLMFVLYGWAVIPLM
YILSFLFSSAATAYTRLTIFNIISGTATFLAVTIMSIPELQLQTLSRLLDKLFMLFPNYC
LGMSFCQFYQNYETISFCTTNILTKEICRIYNITYQLNYFSMNEPGVGCYLVAMSLQGVV
FLVLLFVIELQCISTVFNICRRCKKGKLVKDEALQPEDRDVADERKRVLECQPVVESMVG
SPLILQELTKVYPGSQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTAG
DAFIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVFACVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIHME
ADLEEMDLQLFKDFIESTFPGSLLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYGIE
DYCVSQISLEQVFLSFAQFQHCSEGLRKSD
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtggcgacagtttgggctccttctctggaagaactacctgcagcaaaagcgt
cagatcttggtgacattggtggagatcacactgcccctcctgttttccgccatcctgatt
gcattgcggcagaaggtgtcctttaccaattaccctaatgccacacattacagtagcttt
tcattggaatggcctcctgctttcctaccttacggcttgcaacttgcctacgtgccagga
aactccagtatagtacggcaggtggctgaggatgtgcagctcagcctgaaagcgggcttc
atcagtgctgtgcgtgggtttgaaactgaacatcagtttgaggagtttgtaaagacagac
cctgaatcagcaaagatcctggcagcagtggtgtttgagcactcttttactcaagatgat
gaacctctcccacttcaggtcagctatgatctgcgcttcacctatagcccccggaatgca
ccttccagggaaaaatctgagctgaacccgaacaatgacctcgactggcacactctcagc
ctattcccgcttgttcagctgcctggacctcgagagcagcatgattcttatggaggcact
ccaggttattaccgtgaaggcttcctaatgatccagcatgctgtggaccgagccattatg
aaggcgtacaacaggacagcggcgactgccctcttcatgcagacatgggttgtgttgtca
cgatttccttacccagctttcatctatgatgtcttcatcttggctatccagaaccagctg
ccccttctgctggtgctcagctttacttacacctccctcaatattgtccgagccatagtg
caagagaaagaaagaaaactcaaggaatacatgaaaatgatgggtctgagcaactggctg
cactggagtgcctggttcttcatgttctttcttttcctctcaatctccatcttctttgtc
accttgctcatctgtgtccaggtgagtccaaatggagcagtgctgacctatagtgaccct
acgctagtctttgtcttcctccttgtatttgctgtggctactatcagcttctgtttcatg
atcagctccttcttttccagagctaatgtagcagcagcggcaagtggtttcctctacttt
tttagctacctgccgtacttgttcctgtggccaaggtatgacctgcttactcactctcag
aaagtgtctgcctgtctcatctccaatgtggccatggctatgggtgcccaacttattggc
atgtttgaaggcaaaggcatagggatccagtggagtaatctgtttgagcctgtgactgtg
gatgatgacttctcactggctcaggttcttggactcttgctgctggatgccatactgtac
agcctggtggcttggtacatcgaggcagtgttccctggagagtacggaatgccacgacca
tggtactttttcattctgccttcatactggtgcaacagccctcgagttgccctggtaaaa
gagaaggaggaagaagaggatgcagagaaagcactaaagggcgagttcattgaggaggag
ccaactggattagtctcgggggtcaaaatcaagcacctgaccaaggtttttaaaatgggc
aataagaccaaagaagcagtaaaagaccttacattaaatatgtttgaaggccagatcacg
gtgctgcttggacataatggggccggaaagaccaccacactgtctatgctgactggcttg
tttcctcccagcagtggccgagcttacatcaatggctatgatatatgtcaggatatggtg
ctgatccgccgtagcctaggtctgtgtccacaacatgatgtgcttttcgacaacctcaca
gtccgtgaacatctgcttttttatgcccagctaaagggctacccttgtgagcagattcca
gatgaagtggaacgcataatgcttatcctaaatctggaagataagaagaatgcacggtca
aagaccctttcaggtggaatgaagcgcaagctttctattggaattgcacttataggagac
tcaaaggtggtaatgctggatgagcctacttctggcatggatccatcagctagacgagcg
acatgggatcttttgcagggtgagaaacgaggtcgaaccattcttctcaccacgcacttc
atggatgaggctgacctactgggagaccgcattgctattatggctggtggggaactccaa
tgctgtggctcacctctctttctcaagaacaaatatggtgctggttaccacatggtgata
gtaaaagatgcgatgtgtaatgtatcagagatcagccgactggtccacatgtacgtgccg
aatgccaccctggagagcagtgctggggctgaaatttcatacatcctgccaaaagagagc
acgagccgatttgaactcctgtttgctgagctggaaatgaacagagacgagttgggcatt
gcgagctatggagcatctgttaccaccatggaggaagtttttcttagggtcggcaagctg
gtagactccagtctagacattcaggccattcagcttccagctctacagtaccagcatgag
cgcaggtcacatgactggacagttgatgacgctagcagtatcagtggcatgactgatgtg
actgacttcactgatagtggtacattgatctctgaggactgctctaacatcaaactcaac
acaggggctaagctgtacattcagcagttctatgccatgttcctgaagagggcactgtat
agctggcggaactggaaagtgatggtggcacagtttttagtgccacttatcttcacagta
gtcgcccttgtggtggcccaaacactccctggacaacacaaaacgccggaacttcaccta
gcactcagccgttatggccaaaccactgtgccaatggccctggattccgacgctggaccc
ctggctacagcacttgctgaagcctatgctgcccaacttgctacccagacagtcacacca
gtgaccaatctaactgacttctctgagtatgtattgaacaatgctatgagagaaggcgga
gctttcaacgagcactgtgtggtgggtgctgcatttcggggtcgaaccagcaggtttgct
gaaatcactggctacttcaacaaccaaggctaccacacaccggctactgcgcttatgctg
gtggataatgcgctgtacaggctcctcgctggccctaatgcttccatccagacaggaaac
aaacccatgccccgcaacatgtctgagatagcccagagccagctctcacagggtcagact
ggctttgccattgctattaacctcatgtatggaatggcatctttggccagcacctttgca
ctactcctggttgtggaacgctctgtgaagtccaagcacgtacagcgggtcagcggtgtc
tacatctccaacttctggttctctgcgttgctctgggacctgatcaactttttgctgcct
tgtcttttaatgctggtggtgttccgtgcgtttggtgtgaaagcctttgttgaggaaaat
cacctggtggatgtgttgctcatgttcgtgctttatggctgggctgtgattccactcatg
tatattctcagcttcctgttctctagtgctgctactgcctacacacgcctcaccatcttc
aacatcatcagtggcacagcgacatttcttgctgtcactatcatgagcattcctgagttg
cagctgcagacactttctcggcttctggacaaattatttatgctattccccaactactgc
ctcggcatgtccttctgccaattctaccaaaactatgagaccatcagcttctgcaccacc
aacatcttaactaaggaaatctgcagaatttacaatatcacctaccaactaaactacttc
tccatgaatgaacccggagtagggtgctacctggtggccatgtccctccaaggtgtggtt
ttccttgtccttctttttgtcatcgagctccagtgcatcagcacagtcttcaacatctgc
aggagatgcaaaaagggtaagctggtcaaagatgaagcccttcaacctgaagacagagac
gtggctgatgagagaaagagggttctggaatgccagcctgtggtggagtccatggtgggc
agtcctctcattctgcaagaacttacaaaggtgtacccagggagtcagtctctgctggca
gtggaccgcttgtccctggctgtgggaaagggtgaatgctttggcctgctaggttttaat
ggcgctggaaagacaactacgtttaaaatgctgactggggatgagactgtgactgcagga
gacgctttcatcgatggctacagtattcttcgggatgtaaaaaaggtacagcagcggatt
ggctactgtcctcagtttgatgctgtgctggatcacatgactggccgggagactctcagc
atgtatgcaaggcttagaggaatcccagagaaatatgtgtttgcgtgtgtggagaatgtg
ctccgctcattgctactggagccacatgctgacaaactggtccgcagttacagtgggggc
aacaagaggaagctgagtgcaggtatggctctgattggtgggccacctgtcatcttcctg
gatgagccatccactggcatggaccctgtggccagacgcttgctctgggatgcagtcacg
cgcaccagagaatctggcaaagccattattatcacttcacacagtatggaggagtgtgag
gctttgtgcactagactggctgtgatggtcaatggacagttcaagtgtctgggcagtcca
cagcatctaaagagcaaatttggcagtggatacacattgttggcaaaaatccatatggag
gctgatttagaggagatggaccttcagctctttaaagacttcatagagagcaccttccct
ggaagtttactaaaggatgaacaccagggaatggttcattatcacttaacggacaaaaca
ttaacctgggctcaggtttttgggacccttgaggcagctaaggagaaatatggcattgag
gactactgtgtgagtcagatctcgctggagcaggttttcctgagctttgctcaatttcag
cactgttcagaaggcttgagaaaatcagactga
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integrated database retrieval system
