Clarias gariepinus (North African catfish): 128544405
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Entry
128544405 CDS
T10780
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128544405 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128544405 (srebf1)
04131 Membrane trafficking [BR:
cgar04131
]
128544405 (srebf1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
128544405 (srebf1)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
128544405 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
128544405 (srebf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
ZapB
Motif
Other DBs
NCBI-GeneID:
128544405
NCBI-ProteinID:
XP_053370435
LinkDB
All DBs
Position
16:complement(14502764..14520914)
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AA seq
1124 aa
AA seq
DB search
MNLSFDDPSLDSLDPSLSLNDPNDIDTALLNDIDDMLQLIHNQEMEFSGLFDPTSFPPPP
PAHDLSALPPSSLPPTSLPSSTSSSTSPILSSSPHLDALLGPPLSRNSSTPDKPFHASNF
QQSPSIQVTSTPVTPSQPQVQTAQPVLHLPSQTPQSPTFSSSPQQPLTNYTNQNGYTVVP
QQSSPQPQPVPVPVPSVPTSPQTVQPVTIQAQVQSLPTSPIITTSSSPPAQTHIQQVPVL
LQPQFIKAESLLLTTLKPDVTMVTTVASPCITSLATTTAPIQSTSLQALMNGRTILTTVP
VMVDTEKLPINRIAISNKPGMQIQKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAK
LNKSAVLRKAIDYIRYLQQANQKLKQENMALKMANQKNKSLKDLVAMEVDVKAELPTPPA
SDAGSPEPSGSFSHCSSDSEPDSPMGEDSKSMSSAEKAAGGMLDRSRMAFCAFTLLFLSF
NPLASLVCGSQSKAGESVPPGHSGTGRTMLGFDNAADSWGWMDWMLPTLLVWLLNGVLVA
GVLIKLLVYGEPITRPHSESSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPT
SQLDLVCAVLWSTLRLWLQRLWVGRWLACRAGALRVDRPLQEDARKSSRDAALVYHRLHQ
LHMTGKLGGSHLFALHMALSAVNLAECARDCLSVATLAEIYVSAALRVKTSLPRLLHITS
RGFLSRARQACLSPSGSVPPAMQWLCHPLGHRFFVDGDWSVRSIPKESIYSQAGNTVDPL
AQVTQAFREHLLEKALYCVAQPHGDKSPNQGQGEYSDALEYLQLLNSASDAAGATTQAFA
IGSNMATVTGCDPHSKWWSSLAVVIINWLQGDDVAAERLYPAVEHLPRSLQSDESSLPKA
SLNMFKAVRALLAKPENRQLSLSYCEKASSLFRDSLNLGPHCSSSTLDKLVQLLLCDLLL
VTRTSLWREQQFCSPASPQQSSASAASPAELQGFQQDLSSLRKLAHSFRPAMRRLFLHEA
TARLMAGASPTRTHQLLDRSLRRRATPGGKIEECETRPGQREQAEAAMLACWYLPPSFLS
APGQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVAST
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcttttgacgacccgtcactggatagcttggatccaagcttatccctgaac
gatccgaatgatatcgacacagctctgctgaacgatattgacgacatgctccagctcatc
cacaaccaggagatggagttcagcggcttgtttgatcccacctcctttccaccaccacct
ccagcgcatgatctttcagccctgcctccttccagcttgcctcctacttcccttccttcc
tccacatcgtcctctacatcgcccatcctaagtagcagtccacatctggatgccctgctg
ggtccccctctcagccgcaactcctccaccccagacaagcccttccacgcctcaaacttt
cagcagtctccctccatccaggtgacctctacacctgtgactccgagccagcctcaagtt
caaacggctcaacctgtgcttcacctaccaagccagactccccagagccccacgttctcc
tcaagccctcagcagcctttgactaactacacaaatcaaaatggatacactgtagttcca
cagcagagctcgccccagccccagcctgtgcccgtgcccgtgcccagtgtccccacctct
ccacagaccgttcaaccagtaaccatccaggctcaagttcaaagtctgcccacatctccc
atcattaccacatcctccagtccgcctgcgcagactcacatccagcaggttcctgtcttg
ttgcagcctcagttcattaaggcggagtctctcctccttaccaccctgaagccagacgtg
accatggtaactaccgtagcatctccgtgcatcacgtctctggctacaaccacagctcca
attcaaagcacttcactgcaggccttaatgaacggcaggaccatcctgaccacggttcca
gttatggtggacaccgagaagctgccaatcaatcgtatagccatcagcaacaagccaggt
atgcagatccaaaaaggcgagaagcgtaccgcacacaacgccattgagaagcgctaccgc
tcctccatcaacgacaagatcctagagctcaaagacctggtggctggcacagaggctaag
ctgaataaatcggcagtgctgaggaaagccatcgactacatccgctacctgcagcaggcc
aaccagaagctaaagcaggagaacatggctctcaaaatggccaatcaaaagaacaagtct
ctgaaagacctggttgccatggaggtggacgtgaaggccgaacttcccactcctccagcc
tccgacgccggctccccagaaccaagcggctccttctcgcattgcagcagcgactctgag
cccgacagtcctatgggagaggacagcaagtccatgtccagtgctgagaaggcagctgga
gggatgctggatcgctcccggatggctttctgtgccttcaccctgctgttcctctctttc
aacccactggcgtctctggtgtgtgggagccaaagtaaagctggagaatctgttcctcca
ggtcactcgggaactggcaggaccatgctgggatttgataacgcagctgattcgtggggc
tggatggactggatgctgcccactctgttggtatggctgcttaatggcgttctggtagct
ggtgttctgatcaagctgttggtgtacggagagcccatcactagaccccactctgaatcc
tccgtcttgttctggaggcaccgcaaacaggccgacctcgacctcgccagaggagacttc
gctcaggcctctcagaatctctggacatgtctgaaggcacttggacgtcctctgcccacc
tctcagctggacttggtgtgcgccgtgctctggtccaccctgcgcctttggctgcagaga
ctgtgggtgggccggtggctggcgtgcagggccggtgccctgcgtgtcgaccgcccccta
caggaggacgcacgcaagagcagccgtgacgccgccctggtctaccaccgcctgcaccag
ctgcacatgaccgggaagctgggcggcagccacctgtttgctttgcacatggccctgagt
gcggtgaacctagcggagtgtgccagagactgtctgtctgttgccacgctggctgagatc
tacgtctccgctgccctgagagtaaaaaccagcttgccccgtctactgcacatcacctct
cgtggctttctgagtcgtgctcggcaggcttgtctgtcccccagtggcagtgttcctcct
gccatgcagtggctctgccaccctctgggtcatcgcttctttgtggacggtgactggtct
gtacgcagcatccctaaagaaagcatctatagccaggctggaaacacagtggatcctctg
gctcaggtgactcaggctttcagagagcacctgctggagaaggctctgtactgcgtcgct
cagccacacggagacaaaagccccaaccagggccaaggcgagtactctgatgccctggag
tacctgcagctgctgaacagcgcctcggacgctgcaggagccaccacacaggccttcgcc
atcggctccaacatggccacagtgaccggatgtgaccctcattcaaaatggtggtcgtcc
cttgctgtggtgataattaactggcttcagggagatgacgtagcggcggagaggttgtat
ccagctgttgaacaccttccacgcagccttcagtctgatgagagttcactccccaaagcc
agtttaaatatgtttaaagcagtgcgcgccctgctggccaaaccagagaacagacagctg
agtctgagctactgtgagaaagccagcagtctgtttagagacagtctcaatctggggcca
cactgcagcagcagcactttagacaagttggtgcagctgttactttgcgatctcctcctg
gtgacccgcacgagtctgtggcgagagcagcagttctgttctccagcttctcctcagcag
agctcggcttctgccgcttctcctgccgagctgcagggcttccagcaggacctgagctct
ctgcgcaaactcgcccacagcttccgacccgccatgcgacggttgtttctgcatgaagcc
actgccaggctgatggcaggagcaagtccaacacgcacacaccagctcctggaccgcagt
ctgcgccggcgtgccacacctggaggtaaaatcgaagagtgtgagacacggccaggccag
cgcgaacaggcagaggcggccatgttggcgtgttggtatctcccgccgtcgttcctgtcg
gccccgggccagagggtggggatgttggcagacgccgcccgcactcttgagaagctaggg
gacaagcgcacgctccatgactgccagcagatgatcatcaaactgggcagcgggaccacg
gtcgcctccacttag
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