Clarias gariepinus (North African catfish): 128544449
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Entry
128544449 CDS
T10780
Symbol
ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128544449 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128544449 (ppl)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128544449 (ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Spectrin
Plectin
ERM_helical
DUF4200
Motif
Other DBs
NCBI-GeneID:
128544449
NCBI-ProteinID:
XP_053370549
LinkDB
All DBs
Position
16:complement(4842991..4863042)
Genome browser
AA seq
1757 aa
AA seq
DB search
MFKKKTAKSTLSPSTTSSSKKLDLTTLIEKLQRNADKVEKNILETEQNLNKDVLKINEGK
QPLYQDSTNRTIENSLLMLNGLDEDAAEAKRLQHPQAEMIEQDMKQLRERVKKLRTDHNH
IYHLTRSEGVPSVNWGKIIDEKTANLNNKGFGQDLPTIENEVEEHNIFHSEVEALAPYIG
QGDKDYVDGLQLKYNKLMANSTARQKNLLSLRDYMQRCTNELYWLDQQADERIMYDWSDA
NLDYPARKRQYENFISKCLESKEGTVTKLSDDGEKLIAQGHPGKNVIEAHMDAVHADWKE
YLNLLICEENHLKHMDEYHKFQKEARDTQDLLKRLDTEINQKYNPDFKDQYQLEGLLTDM
NDQAKAMDHFDDRVKTLQNRSLQVLPLKYRREAPQKLVPVEALCDFDTEEGQVQRGARYT
LLRNNGPKWDVKDSAGRTMAAPGVCFFIPPTDPDSVAIAENLVSQQKANKQKLANSKTAL
QARLADLKKDNTGGGQDKQELQCRQLMAGLDKVVNDLDKQEKAIYSQVRPPLEQSRPVQD
SADRQQNLRDISSIVRKIEPEKTSKIREAETFLKSTPKCASAPQLSAKVDTTFNKYSKVE
QLLKCTDDKLQNSNKLERSIQDCKSLLTPYETRLAREEVAPSDPASLDKALRELNDMSSE
LRAKKSIVPDMESNLRTSKLSCDNMVNRVQEHCPDIDRQEAEVQKLSKRYDNILRQLDTR
TQSLQRAKNSYNNYRNDYENLNSWLSRVPNYEPHETDTVQQVDGKLKNQRNLLSDLARKE
SDLNNVSRNAQLYQQAIKDYENEAERFRSILDLEDGLVSQTYKRSRLESPALKVKGEEAA
IEAKFTEVNAVNKQRLQNLEFAQSLLNQQSEMQVIQHNVQSVRSSAPGDESWRVKNQLEE
EILRRQQLEKEIKTIQTDIYVLEGQRPQDTIVKKELIKKVPDPQLDEEMSKVQQRLSDER
RTTRILEGELDTLRVKIRGIETEMKEGAQQYTVKEVLRIERDRGQEEEVRKLREELEELK
RQKLVKDNDVIQIQKQITILSAEKNKEQEVIKQEEVIKVQNDPQLETEYRLLIERKQKEI
DNRKQLEDELRFLQEKLKRLEKEKAMAEEKVSIREVLKVEKDIALEREVDGLRRQLEEEK
SKRMSIQRERTDIQRKITSLEEEKSKVIIQEKMREIVRPDPKAEAEVANLRLELVEAQRR
SRDVELQLKSTQDELLVLRSRGPQVEIKEIIKEVIKYKIDPETERELEKLRNEIVDKTRL
TEKFEIEITQLRDEIQRWRETKPQVQTKEVVNEVLQYREDPQTKEEIETLKKRLAEEQRK
RLDLERERTTIEERIRVKKIDLSQVREKVVQQEVVKMEEDPLLKSECVTFTQNINNELKQ
RELLKDELSRLQRQKADLDLQLEELERERRSRREAELEIQRLRVRLNELEIRDKENREKV
TVKQKVVLQQDPQQEKEHSILRLQVEEERHKRVLLEKEYNALLQQQLTLERMEVREKVVR
TEKVQVEKDPEAELEIERLKRSLEEETRRRQELDIELSSFTTRLTEMEFTHTKSSKELDY
IRDESSRLQQENQRLQNEIRKLQAEIHITSKETRQITESAPMDNSRNLEIRLEALQKELL
DLRRITTEKDEEIERLQKSLSAVRVKREQRESHLRRSIVVIDPDTGKEMRPEEAFKLGLI
DWKMFVNLQSQECDWEEITVKGPNGESSVLHDRKSGIKFSIDDALKSGNITKRQLQQYQN
KEITIQEFGILVSGKSI
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagaagactgcgaagagtaccctgtctccttcaaccacctcgtcctcgaaa
aagctcgatctgaccactctgatcgagaagctgcagaggaatgccgacaaggtggaaaag
aacatcttggagactgagcagaatctcaacaaggatgtccttaagatcaacgagggcaag
cagccgctatatcaggactccaccaacagaacaattgagaactcgctgctcatgctaaac
ggtctggacgaagacgcagccgaagccaagcgcctgcagcacccgcaggctgagatgatc
gagcaagatatgaagcagctgcgtgagcgtgtgaagaagctgcggaccgatcacaaccat
atttaccacctgacacgatccgaaggggttcccagcgtcaactggggcaagatcatcgac
gagaaaacggcaaatcttaacaacaaaggatttggacaagacctgcccactattgagaat
gaagtagaagagcacaatatctttcacagcgaagtggaggccttggctccttacatcggt
cagggagacaaggactacgttgatggcctgcagctgaaatacaacaaacttatggcaaac
tctacagctcgtcagaagaacctgctgagtctgagagactacatgcagcgctgcaccaac
gagctctactggctggaccagcaggctgatgaacgcatcatgtacgactggagcgacgcc
aacctcgactaccctgctcgtaaaaggcagtacgagaacttcatcagtaagtgcctggaa
tccaaggaggggacggtcactaagctgagcgatgacggggagaaactcatcgctcaggga
cacccaggaaagaacgtcatcgaggcgcatatggatgctgttcatgccgactggaaggaa
tatctcaacctgctcatctgtgaggagaatcacctgaagcacatggacgagtaccacaag
tttcagaaggaagccagagacactcaggacctgctgaaacgcctggataccgaaatcaac
cagaagtacaaccctgactttaaagaccagtaccagttggaaggcttgctcacggacatg
aatgaccaagcgaaggccatggatcactttgatgatcgcgtgaaaacccttcagaaccga
agccttcaggttctgcccttgaagtaccgcagggaggcgccacaaaaactcgttcccgtc
gaggcgctgtgtgacttcgacacagaggaggggcaggttcagcgaggagcacgctacaca
ctgctcaggaacaacgggcccaaatgggatgtcaaagactcggccggacgcaccatggca
gcccccggagtgtgtttcttcatcccgcctactgacccggattcagtcgccatcgctgag
aatctcgtaagccagcagaaggccaacaaacagaagctggcgaacagcaaaacagcgctg
caggcccgcctggctgacctcaagaaggacaacacgggtggtggacaagataagcaggag
ctgcagtgtcgccagctgatggccggactggataaagtggtgaacgacctagataagcag
gagaaagccatttattcccaagtgcgcccccctctggagcagagccgtcccgtacaggac
agcgccgataggcagcagaacctgagggacatttcctccatcgtgcgtaagatcgagccg
gagaagacgtccaaaatccgcgaggctgagactttcctcaaatccacccccaagtgtgcc
agcgctccacagctctccgccaaggtcgacacgactttcaacaaatacagcaaggttgag
cagctgctcaagtgtacagatgataaacttcagaactccaacaagctggagcgttcaata
caggactgcaaaagcctgctcacgccctacgagaccaggctggccagagaggaagtcgct
ccctctgacccagcctccctggataaggctctgcgtgaactaaatgacatgagctcggag
ctgagggcgaagaaatccatcgtgccagacatggagagtaatctgaggacctcgaaactc
agctgtgataacatggtgaacagagtgcaggagcactgccctgacatcgaccggcaggaa
gccgaagttcagaaactgtccaagcgctacgacaacatcctcaggcagctcgacaccaga
acacagagtctgcagagagctaaaaattcctacaacaattaccgtaatgattatgaaaac
ctgaacagctggctctcccgtgtgccgaactacgagcctcacgagaccgacacggtccaa
caggtggacgggaaactgaaaaaccaaagaaatctgctctctgacctcgcaaggaaggaa
tcagacctaaacaacgtctcgagaaacgcacagctttaccaacaagcaatcaaggattat
gaaaacgaagctgaaaggttcaggtccattctcgaccttgaagacggcctggtgtctcaa
acgtacaagagaagccgtctggaatctcctgcactgaaagtcaagggagaggaagcggct
attgaggccaaattcactgaggtcaatgctgtgaacaaacaacgtttacagaaccttgag
tttgcacaaagtcttctcaatcagcaatcagagatgcaagtcatccagcacaacgttcag
tctgtgagatcgtctgctccaggagatgagtcctggagagttaagaatcagctggaggaa
gagatcctgagaagacagcagcttgagaaggaaatcaaaacgattcagaccgacatctac
gtgctggaaggacaaaggccacaagacacgattgtcaagaaagagctgatcaagaaggtt
cctgatcctcagttggacgaagaaatgagtaaagtccagcagaggctgtctgatgaacgc
aggaccacccgcatccttgaaggcgaactggatactctacgcgtgaagatacggggcatt
gagacagaaatgaaggaaggcgctcagcaatacacggtaaaagaggtactgcgcatcgaa
agggaccggggtcaggaggaggaagtacgaaagctaagagaagagctggaggagctcaag
agacaaaagctagtcaaggacaacgatgtcatccagatccagaagcagatcacgatcctg
tctgctgagaagaataaggagcaggaagtcatcaagcaagaagaagttataaaggtgcaa
aatgatcctcagctcgagactgagtacaggttgctcatcgaaagaaagcagaaagaaatc
gacaaccgaaaacagctggaggacgagctccgattcctgcaagaaaagctcaagcgtctg
gagaaggaaaaggccatggctgaggagaaggtctccatcagagaggtactcaaagttgaa
aaagatatcgctttggagagagaggttgatggcctgagacggcagctcgaggaggaaaag
tcaaagcgcatgtctattcagagagaaagaacagacatccaaaggaaaattacaagcctt
gaggaggaaaagtccaaggtcatcattcaggaaaaaatgcgtgagatcgtcaggcccgat
cccaaggcagaagcagaggtggctaatctcagacttgaacttgtagaagcgcaaagaaga
tccagagacgtggagctccagctgaagtccactcaggatgaactattggtgctaagaagc
agaggcccacaagtcgaaatcaaagaaatcatcaaggaggttatcaagtacaagatcgat
ccagaaactgaaagagagctggagaaactgcgaaatgaaatcgtggacaagacgcgtctg
acggagaaatttgaaattgagataacccaactgagggatgagattcagagatggagagaa
accaaaccccaggtgcagaccaaagaggtggttaatgaggtccttcagtatagagaggac
cctcaaaccaaagaagaaattgagaccctcaagaagaggctggccgaggagcagaggaag
cgcttggatctagaaagagagcgtactaccattgaagaaaggatcagagtcaagaagatc
gacttatcacaggtcagggagaaggttgtgcagcaagaagtggtaaagatggaagaagac
ccattgctgaagtctgaatgtgtgaccttcactcagaacatcaacaatgagttgaaacag
agggagctgctgaaagacgagttgtccaggctgcagcgtcagaaggctgatctggacctc
cagctggaggagcttgaacgtgagcgcagatccagacgggaagccgagcttgaaattcag
agactgagagtccggcttaacgagctcgagatcagggacaaagaaaacagggagaaggtc
acagtcaaacaaaaggtcgttctacagcaagacccacagcaagagaaagagcattctatc
ctgcgccttcaggttgaggaagagagacataagcgtgtgcttttggagaaagagtacaat
gctctcttgcaacagcagctaactctggagagaatggaggtccgggagaaagtggttcgc
actgaaaaggtccaggtcgagaaagatccagaagccgagcttgagatcgagaggctgaag
agaagtctcgaagaagaaacgcgacgccgacaagagctggacattgagctcagctccttt
accacaaggctgactgaaatggagtttacacacacaaagtcatccaaggagcttgactac
atccgcgacgagagcagcaggcttcaacaggagaaccagcgcctgcagaacgagatcaga
aaactccaggctgaaatccatatcacgtcgaaggaaaccaggcaaatcacagagtccgca
cctatggacaacagcaggaacctggaaatacggctagaggcgttgcagaaagaactttta
gacctgagacgcatcacaaccgagaaagatgaagaaatcgaaaggctacaaaagagtctg
tccgctgtgagggtaaagagagagcaaagggaaagccacctccgacgctctatcgtcgtc
atcgacccggacacaggcaaagagatgaggcctgaggaagcattcaagctggggctgatc
gactggaagatgttcgtcaacctccagagtcaggaatgcgactgggaagagatcactgtc
aaggggccaaacggagagtcgtctgttcttcacgacaggaaatcgggtataaagttctcc
atcgacgacgccctgaagtccggaaacatcaccaaacgccagctgcagcagtaccagaac
aaagaaatcaccattcaagagttcggtatcctcgtttctggaaagagcatctaa
DBGET
integrated database retrieval system
