Clarias gariepinus (North African catfish): 128544474
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Entry
128544474 CDS
T10780
Name
(RefSeq) heat shock 70 kDa protein 1-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
cgar04010
MAPK signaling pathway
cgar04141
Protein processing in endoplasmic reticulum
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128544474
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128544474
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128544474
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128544474
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128544474
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128544474
03009 Ribosome biogenesis [BR:
cgar03009
]
128544474
03110 Chaperones and folding catalysts [BR:
cgar03110
]
128544474
04131 Membrane trafficking [BR:
cgar04131
]
128544474
03051 Proteasome [BR:
cgar03051
]
128544474
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128544474
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128544474
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
128544474
Spliceosome [BR:
cgar03041
]
Complex B
Other components
Prp19 complex
128544474
Complex C
Prp19-CDC5 complex
128544474
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128544474
Chaperones and folding catalysts [BR:
cgar03110
]
Heat shock proteins
HSP70 / DNAK
128544474
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
128544474
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
128544474
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
128544474
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
128544474
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128544474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Hydantoinase_A
DDR
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
128544474
NCBI-ProteinID:
XP_053370583
LinkDB
All DBs
Position
16:complement(8497553..8500099)
Genome browser
AA seq
643 aa
AA seq
DB search
MSSAKGVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAINPNNTVFDAKRLIGRKFDDPVVQSDMKHWPFQVTSDGGKPKVQVEYKGEKKSFNPEE
ISSMVLVKMKEIAEAYLGQKVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKKTESNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
THFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLYEGTDFYTSIT
RARFEELCSDLFRGTLEPVEKALRDAKMDKSQIHEIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSGNVQDLLLLDVAPLSLGIETAGGVMTPLIKRNT
TIPTKQKQTFSTYADNQPGVLIQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTF
DVDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEADKYKAEDELQREKIAA
KNSLESYAFHMKNSVEDESLKGKISEEDKKKVIEKCNEAITWLENNQLAEKEEFEHKQKE
LEKVCNPIITKLYQGGMPAGSCGAQARSASGANSQGPTIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgctaaaggagttgctattgggattgacctgggcaccacctactcctgtgtg
ggggtgtttcagcatggaaaagtggagatcattgctaatgaccagggaaacagaacaaca
cccagctacgtggccttcacagacacagagagactgattggagatgccgcaaaaaaccaa
gtggccattaaccccaacaacacagtgtttgatgccaagcgactgattggcaggaagttt
gacgatccagtcgtacagtctgacatgaagcactggcctttccaagtgaccagtgatgga
ggcaagccgaaggttcaagtcgagtacaaaggagagaagaaatcctttaaccctgaagag
atctcctccatggttcttgtaaaaatgaaggaaatcgctgaggcctatcttggacagaag
gtaacaaatgctgttattactgttccggcctacttcaacgactctcagagacaggccact
aaagatgctggagtgattgccggactgaatgttctgaggatcatcaatgagcccacagct
gcagcgatcgcctatggcttggacaaaggcaagaaaacagagagcaacgtcctgatcttt
gacctgggaggtggtactttcgatgtgtccatcctgaccattgaagatggcatctttgaa
gtgaaagccacagcaggagacactcacctgggtggagaagattttgacaatcgcatggtc
acccactttgtggaggaattcaaaaggaagcacaagaaagacatcagccagaacaagcga
gccctgaggaggctgcgtacagcatgtgagagagccaagagaacactgtcctccagctct
caagccagcattgaaattgactctctttacgaagggaccgacttttacacctccatcacc
agagcacgctttgaggagttgtgttcagacctgttcagaggaacactagagccggtggag
aaagccctgagagatgccaagatggacaaatcccagatccatgaaattgtcctggttgga
ggttcaacaagaatccccaagatccagaaacttctgcaggacttctttaatggacgagaa
ctgaacaaaagcatcaacccagatgaggccgttgcttatggtgctgcagttcaggctgcc
atccttatgggtgacacctctggaaacgtccaggacttgctgctgctggatgtggctcca
ttgtccctgggcattgaaacagcaggaggagtcatgacccctctaatcaaacgcaacacc
accattcccaccaaacagaaacaaaccttcagcacctacgcagacaaccagcctggagtt
ctgatccaggtgtatgaaggtgagagagccatgaccaaagacaacaacctgctcgggaag
tttgatctgacgggcatcccacctgcaccacgcggagttcctcagatcgaagtgaccttt
gacgttgatgccaacggcattctgaacgtgtctgctgtggacaaaagcaccggcaaagag
aacaagatcaccatcaccaatgacaagggcaggctgagcaaggaggacattgagaggatg
gtgcaggaagcagataagtacaaagcagaagatgagcttcagagagagaagattgcagcc
aagaactccttggagtcatatgcttttcacatgaaaaacagtgtagaagatgaaagtttg
aaaggcaaaatcagtgaagaggacaaaaagaaagtgattgaaaagtgtaatgaggccatt
acctggctggagaacaaccagttggcggaaaaggaagagtttgaacataaacagaaggaa
ctggagaaagtctgcaaccccatcatcactaagctgtaccagggagggatgccagctgga
agctgtggagctcaggcacgatccgcttcaggagcaaacagccagggcccaactattgaa
gaagtggattaa
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