Clarias gariepinus (North African catfish): 128544534
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Entry
128544534 CDS
T10780
Symbol
itga2b
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128544534 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128544534 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128544534 (itga2b)
04810 Regulation of actin cytoskeleton
128544534 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128544534 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128544534 (itga2b)
04515 Cell adhesion molecules [BR:
cgar04515
]
128544534 (itga2b)
04090 CD molecules [BR:
cgar04090
]
128544534 (itga2b)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128544534 (itga2b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128544534 (itga2b)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128544534 (itga2b)
CD molecules [BR:
cgar04090
]
Proteins
128544534 (itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
DUF7138
Motif
Other DBs
NCBI-GeneID:
128544534
NCBI-ProteinID:
XP_053370692
LinkDB
All DBs
Position
16:10793116..10816272
Genome browser
AA seq
1049 aa
AA seq
DB search
MERLKNLFVFAIFLTASVFLHQGCSFNLDLTNYVELSGPEGSYFGFSVDFLQAQNQNVSV
IVGAPRDDVGTERGGSVFSCPWDSTKRACQKLKFDETGDVNITLDIMILKAHKSNQWLGA
TVRTYDSYVLACAPLFHWNVIQDKDEAMNTPVGNCQLLDMLTGNIANYAPCRGFEVEHNY
QSKRGVQDRRYCEAGFSSDITKDGNVLLGAPGGFYFQGQIISASLQNIMSLGRTYIPSLE
SETQSSEMYNQYDLYLGYSVAVGHFNADKITDFVASLPLDLNSVGSVKIYDGAPKFYLKF
MMSLTGTQVASYYGHSVAVTDINSDGRDDILVGAPLFMEHLSTHKLREVGQVYVYLQNEV
HRFSPKPDQTLTGTHTYGRFGLTIAPLGDINHDGYNDVAVGAPGSGEGGLVFIYMGQSDG
LNPQYAQVIKSPFQSPTPTFGFSIRGGTDIDNNGYPDVIVGSWGADKVAVYRSKAVVMTK
AQLSFQPDFLQPDEKLCQLHDSPISCFNITMCISVSGYRILEEIVLNAELQLDKMKPNVA
RRTFLLDSQQPYSNFQLTIRRDIGKSCRNFTAYLLSEFKDKLSPILISLNYSLANPHEAM
LHGLNVVVEQTQIVLDCGDDNICIPELILSAMARTDPLLIGDENPALLIITAENRGEGAY
ETELYVRLPPQTHYQGVLSDEEGFSPLLCGPKKDNGTVIVVCELGNPMKAKQKIMAGLYF
SMGGLEEVETHALFHLQIKSKNSQNPDSNTVEVRINVQAVALLEMRGASSPSECVLPIAN
WEPKIVPVNLDDLGPIVEHVYELSNKGPSTVNAKLEIQFPILQNGSYILYVYANASEELL
ACSTDPSQIDPFGLATPEFDNITLMPVHHFNKREVEQEGQNEQKEQAQPEQHHSGPVHVN
CSTETCVVFTCEAPALQRNARAIVRVTARLSVSHFLQSPYVNYVLWSTARYEVVSMMSKI
QPSILPSGQAETNTSVVWRNPDGPENVPVWWIVVSIIAGLLLLALLSFIFWKMGFFKRNR
PPTDNDSDDTAHEPKAEQSEYADVLLDQS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagagactaaagaatctttttgtcttcgctatatttttgacagcaagtgttttccta
catcagggctgtagctttaacctggatttgactaattatgtagaactttctgggccagaa
ggaagttactttggattttctgtggactttttgcaagcacagaaccaaaatgtaagtgtt
atagtgggtgcaccaagagacgatgttgggacagaacgcggtggctctgtattttcctgt
ccttgggattcaactaaacgagcatgtcaaaaactgaagttcgatgaaacaggtgatgta
aatatcacacttgatattatgatccttaaagcccataaatcaaaccagtggttgggagcc
acagtacggacctatgatagctatgtcttggcttgtgctccattattccactggaatgtg
attcaggacaaagatgaggccatgaacacgccagtgggaaactgtcagttactggatatg
ttaactggaaatatagcaaactacgccccctgtaggggttttgaagtggagcataattac
caaagtaaaagaggagttcaagacagacgctactgtgaagcaggatttagctcggacatc
actaaggatggtaatgtgcttcttggtgctcctggtggcttttactttcaaggtcagatc
atttcggcatctctccaaaacattatgtcccttggcaggacgtacattccaagccttgaa
agtgagacacaatccagtgagatgtacaaccagtatgacctttatctggggtactcggtg
gcagtaggtcatttcaatgctgacaaaatcacagactttgtagccagcctcccacttgac
ctaaactcagttggttctgtcaaaatctatgatggagctcctaaattctaccttaaattc
atgatgtctctaaccggcactcaagtagcttcctattatggccacagtgttgctgtgact
gatataaacagtgatgggagggatgatatcttggtcggcgctcctctctttatggagcac
ttgtctacacataagctgcgtgaggtcgggcaagtgtacgtttacctgcagaatgaagtc
catcgcttttccccaaagcctgaccagactttaacaggcacccacacttatggacgtttt
ggcctaactattgctcctttaggagacatcaaccatgacggctacaatgatgtggctgtc
ggggcaccgggttctggtgaagggggtttggtgttcatatatatgggacagagtgatggt
ttgaacccgcagtatgcccaagtcatcaagagccccttccagtctcctacaccaacattc
ggttttagtataagaggaggcaccgacattgacaacaacggatatccagatgttattgtt
ggttcatggggagcagataaggttgctgtgtacagatcaaaagctgtagtgatgacaaaa
gcccagctttcctttcaacctgattttctacagcctgatgaaaaattatgtcaactgcat
gacagtcccatctcctgctttaatatcacgatgtgcattagtgtatctgggtacagaata
ctagaggaaattgtgttgaatgcagagctccagctggataaaatgaagccaaatgtggcg
agacggaccttccttctggactctcagcagccatacagcaactttcagctcactattagg
agagacataggaaaatcttgtagaaacttcactgcatacttactgtccgagttcaaggac
aagctgagccccatccttatctcactgaactacagcctggccaacccccatgaagcaatg
ttacatggactaaatgttgtagtcgaacagacacagattgttcttgactgcggtgatgat
aacatctgcatccctgaattgattctttcagccatggctcgcacagatcctcttctgatt
ggtgatgagaacccagctctcctgatcatcactgctgagaatcgtggtgaaggagcatat
gagaccgaactgtatgtccgtcttccacctcaaacacactaccagggtgtattaagtgat
gaggagggctttagtcctcttctttgtggtccgaaaaaagataatggtactgtcattgtg
gtgtgtgaactgggcaacccaatgaaagctaagcagaagattatggcaggtctgtatttc
agcatgggtggtctagaggaggtcgagacccatgcgttattccatttacaaattaaaagc
aagaacagtcagaacccagacagcaatacagtggaagtgaggatcaatgttcaggctgtg
gctctgctggagatgcggggagcctcctctccttccgagtgcgtcctgccaattgccaac
tgggaaccaaagattgttccagtaaatttggatgatctcggccccattgtagaacatgtt
tatgagttaagtaataaagggccaagtacagtcaacgctaaactggagatccagttccct
atactgcagaatggctcctatatactctatgtgtatgcgaatgcttcagaggagctcctg
gcgtgcagcacagacccttcgcaaatcgatccatttgggcttgcaacaccagagttcgat
aatattactctgatgcctgttcaccattttaacaagcgggaagtggagcaggagggccag
aatgaacagaaagaacaggcgcagcctgagcagcaccacagcggacctgtgcatgtgaat
tgctccactgagacatgtgtggtgttcacctgtgaggctccagcactgcaaaggaatgcc
agagccatagtgagagtgacagcacgcttgtcggtttctcatttcttacagtcgccttat
gtgaactatgtcctctggtctactgcacgttatgaggtagtaagcatgatgtccaagatc
cagccaagcatcttgcctagtggacaagctgaaacgaacacctctgtggtgtggaggaat
cctgacgggccggaaaacgtgccagtgtggtggattgtggtgtccataattgctggcctc
ctactcctggctttgctaagcttcattttctggaagatgggatttttcaagcgcaaccgc
ccaccaactgataatgacagtgatgataccgctcatgagccgaaagcagagcagtcagag
tatgctgatgtcttgctagaccagtcgtaa
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integrated database retrieval system
