Clarias gariepinus (North African catfish): 128544620
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Entry
128544620 CDS
T10780
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544620 (ppfia3)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128544620 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF745
Motif
Other DBs
NCBI-GeneID:
128544620
NCBI-ProteinID:
XP_053370825
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Position
16:1952601..2001197
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AA seq
1217 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGGGPSSPAGGGSGMGGGMGGIGGGYEGGSTGNLESLMVNMLTE
RERLLESLRETQESLGTAQLRLRELGHEKDSLQRQLSIALPQEFAVLTKELNVCREQLLE
REEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKS
LFEHHKALDEKVRERLRVALERVSVLEEELESSTNEVLTLRDQIKRRERGQDNGKERLPN
GPSSILDDGEIDRQREGEIERQRAELSQLKERLALMCRQVGEIEEQLTAARREVTKTEEA
NQKLQREIKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENELASKESLYRQS
EEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQME
AQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLHLKERMAALEEKNALS
EELANMKKIQDDLLANKDQLIAELERLQLELDQLRGRSGSSYSRSLPGSALELRYSQGGG
SLPAGSTTHLDHYGSTGSGGVVRRTHRGRWGGAREDASKYGEWESGALLGPGFEGGVEGG
CSDDEEDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQEEKENTELRAEEI
ESRVSSVALDGPPVPPSSLGRDASGRTFITPSLTSSTLASPSPPSSGHSTPRLPHSPARE
TDRQNNKEDDRSLALLDSTPPPTPRALRLDRMSHTHPGAMLDDSREFRSLSADGSSSNSS
QDSLHKASKKKSIKSSIGRLFGKKEKGRMGQPGRESASLASTPSDDLGSVDPLGLTKMAG
PVDKDRRSKKKHELLEEACRQGLPFASWDGPTVVSWLELWVGMPAWYVAACRANVKSGAI
MANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASTRSSTSNVWMTHAEMESL
TAATKPELKEFSWDQILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLVDARMLDHLTKK
ELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERKRDESQHQNKDVMVWSNERVMCWV
QSIGLKEFADNLAESGVHGALLALDDTFDYTDLALLLQIPNQNTQARQLLEKEYNSLIAM
GTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSETLPANFRASAISTPSVTLRKVQ
SEVSPRGESASVRTYSC
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgcccactatatcggaggacggtcgtggtggaggagggggcggg
ccgtcctcgcccgccgggggcgggagtggcatgggagggggcatggggggcatcgggggt
ggctatgagggcggcagcacgggcaacttggagtctctgatggtgaacatgctgacggag
cgagaacggctgctggagagcctgagagagacgcaggagagtctgggcacggcacagctc
cgcctccgggaactgggacacgagaaagactcgctccagagacagctgtccatcgccctg
cctcaggagttcgccgtgttgaccaaagagctgaatgtgtgtcgggagcagctgctggag
agagaggaggagatcgcagagctcaaagctgagaggaacaacacaaggttgttgctggag
catttggagtgtctggtgtctcgtcacgagcgctctctgaggatgacggtggtgaagaga
caggctcagtctccggccggcgtctccagcgaggtcgaggtgctcaaggctctcaagtct
ctgttcgagcaccacaaggctctggacgagaaggtgcgcgagcgactgcgcgtggctctg
gagcgagtctccgtcctggaggaagagctcgagtcgtctaccaacgaggtcttgactctg
cgtgatcagatcaaacggcgtgagcgtggtcaggacaacggtaaagagcgcctcccgaat
ggcccgtcctccatcttggacgacggagagatcgacagacagagggagggagagattgag
cgccaaagggcggagctttcacagctcaaagagcgactggctctcatgtgcagacaggtt
ggagagattgaagagcagctcacagcagccaggagggaggtgactaagaccgaggaggcc
aatcagaagcttcagagggagattaaagaggctctgtgtcagagagaggatatggaggag
agaataaccaccctagaacgcaggtacctgagcgcccagcgggaggcgacgtctcttcat
gacatcaaagacaagctggagaacgaactggccagtaaagagtctctgtacagacagagc
gaggagaagaacaggcagctgcaggaacgtctggatgacgcaaagcagaagctccagcag
acgctgcagagagccgagacgctgcccgagatcgaggctcagctcgctcagagagtggcc
gctctcaataaggcggaggaacgccatggcaacttcgaggagcgactgcgacagatggag
gcacaactggaggagaagaaccaggagctgcagagagcgagacagagggagaggatgaac
gacgaacataacaagcgtctgtccgacacggtggacaagctgctgtccgagtcgaacgag
cgcctgcagctccacctgaaggagcgcatggcggctctcgaggagaagaacgcactgtct
gaggagctcgccaatatgaagaagatccaagacgatctgctggcaaacaaggatcagctg
attgcagagttggagaggctgcagctggaactggatcagttgaggggcaggtctggctcc
tcctactcccgctctcttcctggcagtgctctggagctcaggtactcccagggaggcggt
tctctacctgctggctccaccactcacctggatcactatggaagtacaggctcagggggc
gtggtcaggaggacccaccgtggacgttggggcggagccagagaggacgccagcaagtac
ggcgaatgggagagcggcgcgttgctcgggccgggtttcgagggcggagtcgagggcgga
tgctctgatgatgaagaggatcgtgagacgctcttcggctctgagctgctttctcccagc
ggacagacggacgtccagacgctggccatcatgcttcaggaacagctggaagccatcaac
aaggagatcaagttgattcaggaggagaaggagaacacggagctgagggctgaggagatc
gagagccgcgtgagcagcgtggctctagacggaccaccggttccgccatcctctttggga
agagacgccagtggcaggacctttattaccccgtctctcacctcctccacattggcgtcg
ccctctccacccagctcgggtcactccaccccacgcctgccccactctccggcacgcgag
actgacagacagaacaacaaggaagacgataggtccctggctctgttggactccacccct
ccaccaaccccacgtgctctccgattggacagaatgagccacacccaccccggagccatg
ctggacgacagccgcgagttccgcagtctctcggcagacggaagcagctctaacagcagt
caggattccctccacaaggccagcaaaaagaaaagcatcaagtcttccatcggccgcctc
tttggaaagaaggagaagggacgcatgggacagcctggccgcgagtccgcctctttggct
tccactccctctgatgatctgggctccgttgatccgctcggtctcaccaagatggccgga
cctgtggacaaggaccgccgcagcaagaagaaacatgagctgttggaggaggcgtgtcgc
cagggccttcccttcgcctcctgggacggccccaccgtggtgtcctggctggagttgtgg
gtgggcatgccggcatggtacgtggcagcgtgtcgtgccaacgtaaagagcggcgcgatc
atggctaatctatccgacacagagatccagcgtgagatcggcatcagtaacccgctgcac
cgcctcaaactgcgcctcgccatccaggagatggtgtcgctcaccagcccctctgccccg
gccagcacccgctcttcaaccagtaacgtgtggatgacacacgctgaaatggagtcactt
acggccgccaccaaaccagagctgaaggagttcagctgggatcagattctggcctatggt
gatatgaaccatgagtgggtgggtaatgactggctgcccagtctgggtctgccgcagtac
aggagctactttatggagtctctggtggacgcccgcatgctggaccacctcaccaagaaa
gagctgcgtggccaacttaaaatggtggacagctttcacagggtgagcctgcactacggc
atcatgtgcctgaagcggctgaactacgaccggaaggagttggagaggaagagagacgag
agccagcaccagaataaagatgtgatggtgtggtcaaatgagcgtgtaatgtgctgggtc
cagtccatcggtttgaaggaatttgcagataacctggctgaaagcggagtgcatggagct
ctactcgccctggacgacaccttcgattacactgacctggccctgctactgcagataccc
aaccagaacacacaggcacgccaactcctggagaaggagtacaactccctgattgccatg
ggaactgagaggaggccagatgaggatggcaccaaaaccttcactcgctccccgtcctgg
aggaagatgttccgtgagaaggatcttagaggagtgacctcagactcatcagagacgctg
cctgctaacttccgcgcctcggccatctccactccatccgtgaccctgcggaaggttcag
agtgaagtgtcaccaaggggcgagtcggcatcagtgaggacctactcttgctga
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