Clarias gariepinus (North African catfish): 128544640
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Entry
128544640 CDS
T10780
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04517
IgSF CAM signaling
cgar04530
Tight junction
cgar04810
Regulation of actin cytoskeleton
cgar05100
Bacterial invasion of epithelial cells
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128544640 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128544640 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
128544640 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128544640 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128544640 (zgc:86896)
05100 Bacterial invasion of epithelial cells
128544640 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544640 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128544640 (zgc:86896)
Membrane trafficking [BR:
cgar04131
]
Others
Actin-binding proteins
Arp2/3 complex
128544640 (zgc:86896)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128544640 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Rax2
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
WDR90_beta-prop_4th
Fibrillarin
PEP5_VPS11_N
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-GeneID:
128544640
NCBI-ProteinID:
XP_053370853
LinkDB
All DBs
Position
16:complement(4707906..4714866)
Genome browser
AA seq
357 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAVSPNSSVVYIYQKKGKEWSKIHELKEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDAVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLI
SVCYFEKENDWWLSKHIKKGICSTVLSLDWHPNNILLAAGSADLHCRVFSTYIKEIEDKP
GPTPWGAKMPFGEMLLENKDCGGWVHSVAFSPSGDTLAWVSHNSSISVADATQGKEITQL
TTEHLPLLSVLYVNETEIVAAGHDCCPYQFSYKGSGKLDFVRKLGIAKQTSKNSMSAMQH
FRNLDKKATADEEDNELNSLHQNSITQLCVVEGDKAKVEKFSSVSLDGSMVLWEFKP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagcttcgggttagagcctctgtcctgtcacgcctggaacaaagaccga
actcagatcgccgtcagccccaacagcagtgtggtgtacatttaccagaagaaggggaag
gagtggagcaaaatccatgagctgaaggagcacagcgggcgaatcacaggaatcgattgg
gccccggagtcgaaccgtatcgtgacatgcgcctcagacagaaacgcctacgtctggacg
ctgaaggatgccgtctggaagccgactctcgtcctcgtacgcatcaacagagccgccacg
tgtgtcaagtggtcacctctggagaacaagttcgctcttggaagcggagccaaactcatc
tcggtgtgttacttcgagaaagagaacgactggtggctcagtaagcacataaagaaaggg
atctgctcgaccgtgctcagtctggactggcatcccaacaacatcctgctggcagccgga
tcagccgatctccactgcagggttttctccacgtacatcaaggaaatcgaggacaagccc
ggcccgacaccatggggagccaagatgccgtttggcgaaatgcttctggagaataaagac
tgtggtggttgggtgcacagcgtcgccttctcaccgtccggagacacgctggcctgggtc
agccacaacagctccatcagcgtcgcagacgccacacagggcaaagagattacgcagctg
actacagaacatctgccgctgctcagtgtgctgtacgtcaacgagacggagattgtggct
gcgggccacgactgctgtccctaccagttctcctacaaggggagcggcaagctggatttc
gtgcgaaagctgggcatcgccaagcagacgtccaaaaacagcatgtcggccatgcagcac
ttccgcaacctggacaaaaaggccacggccgacgaggaggacaacgagctgaacagtcta
caccagaacagcatcacccagctgtgtgtggtggagggagacaaggccaaagtggaaaag
ttcagtagtgtcagtctggatggatccatggtgctctgggaattcaagccttaa
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