Clarias gariepinus (North African catfish): 128544681
Help
Entry
128544681 CDS
T10780
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04136
Autophagy - other
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128544681 (wipi1)
04136 Autophagy - other
128544681 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544681 (wipi1)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128544681 (wipi1)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128544681 (wipi1)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128544681 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
ANAPC4_WD40
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
EIF3I
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
128544681
NCBI-ProteinID:
XP_053370930
LinkDB
All DBs
Position
16:complement(4690132..4705220)
Genome browser
AA seq
442 aa
AA seq
DB search
MESGEGGGGARGPALRCASFNQDSTSLAVGTKEGYRLFSITAVDKLECIHESAENPDVYI
VERLFSSSLVVVVSHSMPRRMNVYHFKKGTEICNYSYSNSILAVRLNRQRLVVCLEESIY
IHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSATIGEIILYDANNLNTVTVI
PAHDSQLAAITFNASGSKLASASERGTVIRVFSIPEGQRLFEFRRGMKRYVNISSLSFSP
DAQFLCASSNTETVHIFKLEQHGHGREEENPSWSAYVGKMFSAASSYLPAQVSGMMSQDR
AFATVRLNTHGHKHTCTLTTIQKLPRLLVASSEGQLFIYNIDPQDGGECTLVHNHRLLGS
EEEAEACEGTVAPSYAATAAIGTSGPDSAKLTGYSEDGGVMKGEVIPEHEFAAGPVCLDD
ETEFPPINRCLGGSRRGRTGRP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggagaaggaggcggtggagcccgcggcccggcactgcgctgcgcctccttt
aaccaggactccacgtcgctggcggtgggtactaaggaaggttacagactgttctccatc
accgccgtggataaactggagtgtattcacgaaagtgcagagaatccggacgtctacatt
gtggaacgtttgttctccagcagcctggtggtggtggtgagccactcgatgccgcgccgc
atgaacgtctatcacttcaagaagggaacagaaatctgcaactacagctactccaactct
atcctcgccgtgcgcctcaaccgacagaggctggtggtttgtctggaagagtccatttac
atccacaacataaaggacatgaagcttctgaagactcttctgaacacaccgtccaacccc
tcaggtctctgtgctctctccatcaaccattccaattcttacctagcgtaccccggcagc
gccaccatcggagaaatcatcctctacgacgctaacaacctgaacacggtgaccgtgatt
ccagctcatgatagtcagttagccgccatcaccttcaacgcctccggcagcaaactggcc
agcgcctcagagaggggcacagtgatccgagtgttttccattccagagggacagagactg
tttgagtttcgcagaggaatgaagagatacgtgaacatcagctctctgtccttcagtccc
gatgctcagttcctgtgtgcctcgagcaataccgagacagtccacattttcaaactggag
cagcacggacacggtagagaggaggagaacccctcgtggtcggcgtacgtgggcaagatg
ttttcggcggcgagcagctacctgccggcacaggtttcaggcatgatgagtcaggatcga
gcgttcgcaacggtccgcctcaacacacacggacacaaacacacctgcactttaacaaca
atccagaagcttccacggctccttgtagcctcgtccgaagggcagctctttatttataac
attgaccctcaggatggaggagagtgcacgctggtacacaaccacaggctcttgggatcg
gaagaggaggccgaggcgtgtgagggaacggtggctccttcctacgctgccacggcggcc
atcggcaccagcggacccgactctgccaagctaaccggatattccgaggacggtggggtg
atgaagggcgaggtgattccagagcacgagttcgccgccggtcccgtgtgtctggacgac
gagaccgagtttcctccaataaatcggtgtcttggcggatcccgtcgtggcagaaccggc
cgtccgtga
DBGET
integrated database retrieval system
