Clarias gariepinus (North African catfish): 128544856
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Entry
128544856 CDS
T10780
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a
KO
K06493
integrin beta 3
Organism
cgar
Clarias gariepinus (North African catfish)
Pathway
cgar03266
Virion - Herpesvirus
cgar04081
Hormone signaling
cgar04145
Phagocytosis
cgar04148
Efferocytosis
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04517
IgSF CAM signaling
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
128544856 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
128544856 (itgb3a)
04512 ECM-receptor interaction
128544856 (itgb3a)
04517 IgSF CAM signaling
128544856 (itgb3a)
04518 Integrin signaling
128544856 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128544856 (itgb3a)
04148 Efferocytosis
128544856 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128544856 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128544856 (itgb3a)
04810 Regulation of actin cytoskeleton
128544856 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128544856 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128544856 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128544856 (itgb3a)
04515 Cell adhesion molecules [BR:
cgar04515
]
128544856 (itgb3a)
04090 CD molecules [BR:
cgar04090
]
128544856 (itgb3a)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128544856 (itgb3a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128544856 (itgb3a)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin beta subunits
128544856 (itgb3a)
CD molecules [BR:
cgar04090
]
Proteins
128544856 (itgb3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_integrin
EGF_2
PSI_integrin
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
128544856
NCBI-ProteinID:
XP_053371125
LinkDB
All DBs
Position
16:10958670..10977152
Genome browser
AA seq
792 aa
AA seq
DB search
MGMFLPPIWAVLTVLTALSIASGSNICTSRGVGTCKECLSIHPSCTWCSQKNMASNSSSV
SRCNQKSILLESGCKPQFIESPVSSIVVEEDRPVSDHAHGSAGDITQIQPQRIRLTLRPD
DSKRFKVTVRQVADYPVDLYYLMDLSYSMADDLSNLRSLGSELAKAMGSTTSNLRMGFGA
FVDKTLSPYMYMFPAEAISNPCLRGFKTPTTCSPQFGYKNILSLTEQVDRFTEEVKKQQV
SRNRDLPEGGFDAIMQTVVCKDKIGWRPDASHLLVFTTDAASHTALDGKIAGIVQPNDGK
CYTDNNNIYDKTTILDYPSIGMLTDKLTENNINLIFAVTEDVIPLYLNYSKLIPGTTVGK
LFKDSKNVIELILDAYANIRSKAELEVLGVPDELDLSFNATCLNGQVVPGVKSCSGLKIG
DTVSFTVEATLRGCPKEKSHTFIIKPLGFKDTLQVTVDFACNCSCQDSAQPASPACHNGN
GTLECGVCLCDPGRLGPHCECSEVDYKPTDTDSCEHTPGAAVCNGRGDCVCGQCNCHSKD
FGKIWGKYCECDDFSCIHSKGQLCSGHGDCVCGFCQCHPGWSGESCNCSTRTDTCMASIE
LLCSGRGECLCGVCACTLPGAYGATCEKCPTCPDSCTLKKDCVECKHYKRGPLFEKNNCN
TAICRDEIILVDELAFREKSSVNCSYKDEDDCIHHFQYYEDISGKSFLYLVKEPECPKGP
DILVVVASVIGSIFLLGLAALLVWKLLVTIHDRREFAKFEEERAKAKWEAANNPLYKGAT
TTFTNVTYRGNS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtttctgcctcctatttgggcagtattgactgtcctcacagcactttctata
gcttcgggctcaaacatatgtacttccagaggagtcggaacgtgcaaagaatgtctgtcc
attcatccgtcttgcacttggtgttctcagaaaaacatggcttccaacagctccagtgtt
tcccgttgtaaccaaaagtccatcttgcttgagtctggatgtaaaccacagtttattgaa
tctccagtcagtagcattgtagtggaagaggaccgtcctgttagtgaccatgctcatggc
tcagctggtgacatcactcagattcaaccacagcgtatccgtctgacattaaggccagat
gattcgaagcgttttaaggtgaccgttcggcaggtggctgattaccctgtagatctctac
tacctgatggatttgtcctattctatggcagatgacttgagcaacctccgctcccttggc
agtgagctggctaaagctatgggtagtaccaccagtaacctgcgcatggggtttggggca
tttgtggataaaacactctccccatacatgtacatgtttccagctgaggccataagcaac
ccatgtcttaggggtttcaagacgcccactacctgctcgccgcaatttggttataagaac
atcctttcactgacagagcaggtggatcggttcacagaggaagtgaaaaaacagcaagta
tcaaggaatagagacttgccagaaggaggatttgatgccatcatgcagactgtggtctgc
aaggataaaattgggtggcggcctgacgcatcccacctgctggtgtttactacagatgct
gcaagccacacagcattggacggcaaaatcgcaggcattgtccagcccaatgatggaaaa
tgttacaccgacaacaacaacatctatgacaagactactatactggactatccctccatt
ggaatgctcactgacaaactgactgagaataatatcaaccttatctttgctgtaactgag
gatgtgataccgctgtatcttaattacagtaagttgattcctggtaccactgttgggaaa
ctgttcaaggactcgaaaaatgtcatcgaactcatcctggatgcgtacgcgaatatcagg
tcaaaggcagaactggaggtgttgggtgttccagatgagctggacttatcgtttaatgcc
acatgcctcaatggacaggtagtgcccggcgttaaatcctgctcaggacttaaaatcgga
gacacagtatcattcactgtagaggcaactcttcgtggctgtcctaaagagaagagtcat
acattcatcatcaagcctctgggctttaaggatacactgcaggtgacggtggattttgca
tgcaactgttcatgtcaagattctgctcagcctgctagtccggcctgtcataacggtaat
ggcacgctggagtgcggggtgtgtctgtgtgacccgggacgtctcggaccacattgcgag
tgtagtgaggttgattacaagcccaccgacacagacagctgtgaacacacccctggtgca
gctgtctgcaatggacgaggcgattgtgtgtgtggtcagtgtaactgtcactcaaaagac
ttcggaaagatttggggcaaatactgcgagtgtgacgacttcagctgcatccactccaaa
ggacaactttgctctggtcatggcgattgtgtatgcgggttctgtcaatgtcatcctggc
tggtcaggcgaaagctgtaattgctccacaaggacggacacctgcatggccagcattgag
ctgctgtgtagcggccgtggtgagtgtttgtgcggtgtgtgtgcatgcaccctgcctgga
gcgtacggtgccacctgtgagaaatgtcccacctgccctgactcctgcaccttaaaaaag
gactgcgtggagtgtaagcactataagagaggaccactgtttgagaagaacaactgcaac
actgcaatctgtagagacgaaattatattggtggatgagctagccttccgtgagaaaagc
tcagtgaactgcagttacaaagacgaggacgattgcattcatcacttccagtactacgaa
gacatcagcgggaaatccttcctctacctcgttaaagaacccgagtgccccaaaggtcct
gatattctggtagttgtggcttccgtcattggctccattttcttgctgggcctggctgct
ttgctggtgtggaagctgttggtcacgattcatgaccgccgggaatttgccaagtttgag
gaggaaagagctaaggccaagtgggaagcggccaataacccattgtataaaggagctact
actacttttacaaatgtgacctatcgtggcaactcctaa
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