Clarias gariepinus (North African catfish): 128544922
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Entry
128544922 CDS
T10780
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128544922
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128544922
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgar01001
]
128544922
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgar04090
]
128544922
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128544922
Protein kinases [BR:
cgar01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
128544922
CD molecules [BR:
cgar04090
]
Proteins
128544922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
Ig_2
I-set
ig
VEGFR-1-like_Ig-like
C2-set_3
MGC-24
Motif
Other DBs
NCBI-GeneID:
128544922
NCBI-ProteinID:
XP_053371213
LinkDB
All DBs
Position
2:15491526..15508664
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AA seq
964 aa
AA seq
DB search
MILFTFIVGLLSCQVQALSHPRIKVNGEDPAETDVVIDSGSRLKLTCDGDAPVNIEPRLA
KYKSHSKPNGNSCTFNVQKATYKLTGTFKCVYTDKNSYIFSSVYIFVRDPKILFDTPLTT
HIIMKEGENALIPCLLTDPAATDVQLGMKNGSALPSNMNVTFDPKKGMLIRDLKPWFSSE
YVCSARIGGEEKKSSAFNLKVTDRVRFPPYVFLQKKEHIRLVGERLELICSASNRNFNYN
ITWKHSSHLLPKPETSAAWESGNLKIKSTVILPAVTMSDSGNITCIGANEAGVNSSTAHL
LVIDKPYIRLTPKLSPHLIHEGLSINISEAENVELRVSIEAYPQITFKKWKGPTFLNNSQ
HDIHFSGNDYRYEAVLLLKRLNSKEQGRYTFYANSSKTNASITFSIHVYETPIIVDKRRN
ESFLVCKASGFPAPQIFWFQCQGTRPMCRENSTDVEVHQLFTAETVEMKNNEFQPVEVES
VLTITPSYQKMTIECIARNRVGEARDVFPIDQSEKLFTATLIGAISVMVFLLLLLIILIY
KYKQKPKYEIRWKIIEATDGNNYTFIDPTQLPYNEKWEFPRDKLKLGKILGSGAFGKVVE
ATAYGLGKDDNVTRVAVKMLKASAHSDEKEALMSELKILSHLGQHKNIVNLLGACTHGGP
VLVITEYCCHGDLLNFLRNKAETFLQCVISIPEETSNYKNVHKMFYRSDSGVSSTCSDSY
LDMKPLVPRSHLSRIPSCNQEKEENSLDLDDLIKFSYQVAHGLDFLASKNCIHRDVAARN
VLLTDGCVAKICDFGLARDIMNDANYVVKGNARLPVKWMAPESIFECVYTVQSDVWSYGI
LLWEIFSLGKSPYPNILVDSKFYKMIKSGYQMSRPDFAPPEMYNIMKMCWNLEPTERPTF
SKITQLIERLLEEIPDKTPYQNVQMEELDEEQLEACDTTKRDEESCEQVEEEQPLVKPNN
YQFC
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcttcacctttattgtggggctgctgtcctgtcaggttcaagccttgtctcat
ccgagaataaaggtaaacggagaagatccggctgaaactgacgtggttatcgactctggt
tcgcgtctcaaactgacctgtgatggtgatgctccagtgaatattgaacctcggttagct
aaatataaatcacacagcaagcctaatgggaacagctgcacctttaatgttcaaaaagct
acctacaaattaacaggcacttttaagtgtgtgtacactgacaaaaattcctatatcttc
tcatctgtgtacatatttgtaagagatccaaagattctctttgacaccccgctgactact
catattataatgaaagaaggagagaatgccctcatcccctgccttcttactgacccggcg
gccactgatgtccagttgggcatgaaaaatgggtctgcactaccctctaacatgaacgta
acttttgaccccaagaaagggatgctaattcgggacctcaagccttggttcagttcagag
tatgtctgcagtgcaaggataggaggagaagaaaaaaagtcttcagccttcaatctaaaa
gtcactgatagagtccgttttccaccctatgtgtttcttcagaagaaggagcatattcga
cttgttggagagagactagaactcatctgttctgccagcaatcgtaactttaactacaac
atcacctggaagcactcatcacatttgcttccaaaaccagagacctcagccgcctgggaa
tctggaaacttgaaaatcaagagtactgtgatcctgcctgctgttaccatgtctgactct
ggtaatatcacctgtatcggagctaatgaggctggagtcaacagctccacagcacacctt
ctggttattgataagccatacattagactgacccccaagctgtcccctcatctgatccat
gagggtttgtctattaatatcagtgaggcagagaatgttgaactaagggtgagcatagaa
gcatacccacaaatcacattcaaaaagtggaagggaccgacatttcttaacaactcacag
catgacattcatttctccggcaatgattacaggtatgaagcagtgctgcttctgaagaga
ctgaattccaaggaacagggcagatacaccttctatgccaacagcagcaagactaatgcc
tccataacatttagcattcatgtttacgaaacaccaattatcgttgataaaagaaggaat
gagagcttcttagtatgcaaagcatctgggttcccagctccccaaatcttctggttccag
tgtcaaggaaccagaccgatgtgcagagagaattccactgatgtggaggttcaccagtta
ttcacagctgagacagtggagatgaagaacaatgagtttcaaccagttgaagtggaaagt
gttttaacaatcacaccatcctatcagaagatgactatagagtgtatagcccgaaatcgc
gttggggaagcccgtgatgttttccctattgaccagtctgagaaactctttactgcaaca
ttgattggcgccataagtgtaatggttttcctccttctactccttatcatcctcatttac
aagtataaacagaaacccaaatatgagatccgatggaagattattgaagccacagatggg
aacaactacacatttatcgaccccacacaacttccttataatgaaaaatgggaatttcca
agagacaaactcaaattggggaagattttgggctcaggagcattcgggaaagtggtggag
gcgacagcgtatggtctaggaaaggacgacaatgtgactcgtgtggctgtaaaaatgctt
aaagctagtgcccattcagacgagaaagaggctctaatgtccgaactgaagattctaagt
catctaggacaacacaagaatattgtcaacctgcttggagcctgcacacatggaggtcct
gtgctggtcatcactgaatattgctgtcatggtgatcttctgaacttcctgcgcaataaa
gcggagaccttcttacagtgtgtgatttcaatcccagaagagactagcaactacaaaaac
gttcacaagatgttttatagaagtgacagtggggtttccagcacttgttcagacagttac
ctggacatgaagcctctagtgcccagatctcacttgtcacgcattccttcctgcaaccaa
gaaaaagaagaaaactcattggatttggatgacttgatcaaattctcctaccaggtggct
cacggacttgacttccttgcatctaaaaattgcattcacagagatgtcgcagccaggaac
gttcttttaacagatgggtgtgtggccaaaatctgcgactttggactggctcgtgatatc
atgaacgatgctaactatgtggtcaaagggaatgctcgtttgccagtgaagtggatggct
ccagagagtatctttgagtgtgtgtataccgtacagagtgatgtttggtcgtatggtatt
ctgctgtgggagatcttctctctgggtaaaagcccatatccaaacatcctggtggactct
aaattctataagatgataaagtctggctatcagatgtcccgtcctgacttcgccccaccc
gagatgtacaacatcatgaaaatgtgctggaacctcgaacccacagagcggccaactttc
agcaagatcacccagcttatcgagaggctgctggaagaaataccagataagactccgtat
cagaatgtgcagatggaagaactggatgaagagcagctggaggcctgtgataccaccaaa
cgtgatgaggaatcatgtgaacaggtggaagaagagcagcccctggtgaagcccaacaac
taccagttctgctaa
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