Clarias gariepinus (North African catfish): 128544977
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Entry
128544977 CDS
T10780
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128544977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128544977
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Serotonin (5-HT3)
128544977
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128544977
NCBI-ProteinID:
XP_053371265
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All DBs
Position
16:complement(19256588..19262334)
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AA seq
381 aa
AA seq
DB search
MRILKFSSIVYFFIVLLVCSNFIVRSLATCTTRRCLANNIIAMELFSPPMPPGCRITVNL
TSIQYETLSVDTQALRFSSRIRIEMEWNDPDLAWNITEYGFPELMMPFDKIWTPDLTVDN
AIQTDVKPVTNDILVRYDGTVQHTINLYTTVVCQINLFTYPFVEDACPVALNGWREKNCG
ILINYGNVSSVGEDRGEWITVSVELHQDKMHMDRNYLYVTMSTNPFNTIVTLILPSVLIM
IADLGSFALPLEGGKRSTFKITLVLSFTMSLLILTDQLPDTGFCSPMIRYHFCFCLIILV
VSLLTSMVFSHFADNGAIMPKLSHVIQRPKPLEFSNTDGKDEIKKGMVLAVSLSPLQEVN
CMIELRLRQQMINLASLKPYQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctgaaattttccagcattgtttattttttcattgttctcctagtgtgctcc
aactttatagttagatctttggcaacttgcaccactcgtcgatgcctggctaacaacatc
attgcgatggaacttttcagccctccaatgcctccaggatgtagaataacagtgaatctc
acatccattcaatatgagaccctgtctgtggatactcaggccctgcgtttctcgagtcgc
attagaattgaaatggaatggaacgacccagaccttgcatggaatataacagaatatggg
tttccagaacttatgatgccttttgacaaaatctggactcctgatctaactgtagacaac
gcaatccaaactgatgtcaagcctgtcactaatgatatactcgtgagatatgatggcact
gtgcaacacactatcaacttgtatacgactgtggtgtgtcaaatcaacctttttacctac
ccttttgtagaagatgcatgcccagtcgcccttaatggatggagagaaaaaaattgtggc
atacttatcaactatgggaatgtatcttcagtgggagaagatcgtggtgaatggataact
gtatcagtggagctacatcaggacaaaatgcacatggatcgcaactatctctatgtcact
atgtccaccaatccattcaacacaatagtgacgctcatcctccccagtgtactcatcatg
atagcagatctggggagctttgctctgccattggagggcgggaaacgcagcacctttaaa
atcactctggtgctcagctttaccatgtccttgcttatcctcactgaccaactgcctgac
actggcttctgcagccccatgatccgctatcacttttgtttctgcttaatcattttggtt
gtgagcttgctgacatccatggtgttctcacattttgcggacaatggtgccatcatgccc
aaattgtcccacgtcatccagcgccccaaaccacttgaattcagcaacactgatggcaaa
gatgagataaaaaagggtatggttttggctgtgtctctttctcctcttcaggaggtgaac
tgtatgatcgagttaagattaagacaacagatgattaacttggccagtcttaaaccttac
cagtaa
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