Clarias gariepinus (North African catfish): 128545009
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Entry
128545009 CDS
T10780
Symbol
pecam1a
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04148
Efferocytosis
cgar04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128545009 (pecam1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128545009 (pecam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgar04090
]
128545009 (pecam1a)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128545009 (pecam1a)
04091 Lectins [BR:
cgar04091
]
128545009 (pecam1a)
CD molecules [BR:
cgar04090
]
Proteins
128545009 (pecam1a)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
128545009 (pecam1a)
Lectins [BR:
cgar04091
]
I-type lectins (Siglecs)
128545009 (pecam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
Zwei_Ig_N
V-set
Ig_4
C2-set
F59B103_C
DUF3377
Ycf70
Motif
Other DBs
NCBI-GeneID:
128545009
NCBI-ProteinID:
XP_053371301
LinkDB
All DBs
Position
16
Genome browser
AA seq
743 aa
AA seq
DB search
MACWPLWLTVVLICFLTLWQDAKAQPTFTIDLVELTILPGTKVQSGSNLTLYCKVSVSQN
TQLIHTLMFLKDETVIYSKNTSDSLLEYSLVPARAGHSGNYKCQVQIFSKERSSKSQRLT
VTGLQTPKLKVQAKTVTEGDTHAVTCSAPEEIGGLYFIFYKNDEEFFSGPNKDNTVTLPV
KFDSPGKFSFYCKYTLMLHPLAGSSTNSNIVNILVRELEITPSIRISPNTAVVEGDRVHI
YCNVSGYSRKDIEVFLTKDTVLLKLDKSFSYSFEVTANASGEYVCKIERDNVQKSSKAKL
QVAELFSRPVLTMTPNDVFEDQQFNLSCRSYNISKKQIAPTDVKYSLYKDEKLLTAGHIF
STSASKVSSGNYYCKAEAKGITKASTPLVIKVKVPVSAPVIRTKGKMIIGQQFQLQCESQ
YGAFPITYTLLKFQKEMKQITLTGPNRIASFNITLSYKNESHSFSCIAENAGGRYKKSSS
FLNEPVIETVSIPDLTYDTKDYMVTEGVRLSLICSVQQGTLPITFTWYRSGVAKPLNTTK
ISKKQGVYIIKSITRENEGRYYCHASNGADVTKSSLQVTIRVNLANWKKALVGVSCILLL
VLVVIILIIFLKKAHTPQRRKRAVELSVKPARTKSNDPMRVSLTLDIEDNTTGNATPGIM
GRNVWSDHVSSSESDEEKDNEESEKPQHGGEPLIQNVDNGGGHVMHDTDTVKGEFPDTTQ
DESDQVHTDPEYVQLNSCQQEPE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgctggccattgtggctcactgtggtcctcatctgctttttaacgctgtggcag
gatgccaaggcacagccaactttcaccattgacttggtggagctgaccatcctcccagga
accaaagtgcaaagtggcagcaacttaaccctctattgtaaagtcagtgtcagccagaat
acacaactcatacacacgctgatgttcctgaaggatgagacagtgatttactccaaaaac
accagtgactctttgctggagtacagcctagtcccagccagggctggtcactcaggcaat
tacaaatgccaagtccaaatcttctcaaaggagaggagcagcaagtcacagagactcact
gtaacaggcctgcagacaccaaagctgaaagtacaggccaaaactgtgactgagggtgat
acacatgctgtcacatgcagtgcaccagaggagatcggtggcttgtatttcatcttttac
aagaacgatgaagagtttttctctggccctaacaaagacaatacagtaacgcttccagta
aaatttgatagcccaggaaaattctcattttactgtaaatacacgcttatgctacatccc
cttgcaggcagctcaaccaacagcaacattgtgaacatcttagttcgagaactggaaata
acaccatcaataagaatttcccccaatacagctgttgtggagggggaccgggtgcacatt
tactgcaatgtttcaggttactcccgaaaagacatagaagtcttcctcaccaaagacact
gtgttacttaaactcgataaatcattcagttacagctttgaggtaacagcaaatgcctct
ggagaatatgtatgcaaaattgaaagggataatgttcagaagagctccaaggccaagctg
caggtagcagagttgttctcaagacctgttctaactatgactccaaatgatgtgttcgag
gaccaacaattcaacctgagctgcagaagttataatatctctaaaaagcaaatcgctcct
acagatgtgaagtacagtctgtataaagacgagaaacttctaacagctggacacatcttc
agcacttcagcaagtaaagtcagcagtggaaattattactgtaaggctgaagctaagggc
atcaccaaagccagcacaccattggttattaaagttaaagttcctgtttcagctccagtc
attcgcacgaaaggaaagatgatcataggacagcagtttcagctccagtgtgagagtcaa
tatggagcgtttcctatcacctacaccttactgaagttccaaaaggaaatgaaacaaatt
acactgactggtcctaatcgtattgcttcattcaacatcactctcagttacaaaaatgag
agccacagcttcagctgcatagctgagaacgcggggggacgctacaaaaaatctagttca
tttctcaatgaaccagtcatagaaactgtgtccataccagacttgacttatgacactaag
gattacatggtgaccgaaggtgtgagactcagtctcatctgcagtgtgcagcaaggaaca
ttaccgataaccttcacttggtaccgcagtggagttgcaaagccactgaacaccacaaag
attagcaaaaaacagggagtttacatcatcaagtccataacccgtgaaaatgaaggaaga
tactactgccacgcttccaatggtgcggatgtgacaaagagcagtcttcaggtcaccatc
agagtgaacttggcaaactggaagaaggctctcgttggtgtgtcctgtatactacttttg
gtgctcgttgtcattattcttatcatttttctcaagaaagcacatactccacagagaaga
aaaagagcagttgagttgtctgtaaagcctgcaaggactaagtctaacgatcccatgagg
gtgagtctgactcttgacattgaggacaatactacaggaaatgccactcctggtattatg
ggccgaaacgtgtggagcgaccatgtatcaagctcagaatctgatgaagagaaggacaac
gaagagtctgagaaacctcaacatggtggtgaaccactcatacagaatgtggacaatgga
ggagggcatgttatgcatgatacagacacagtgaaaggtgaattcccagacaccacacaa
gatgaatcagatcaagtgcatactgatccagagtatgtccagcttaacagctgtcaacag
gaacctgagtag
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